Trichomycterus rosablanca: 134300323
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Entry
134300323 CDS
T09921
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134300323 (ubtf)
03021 Transcription machinery [BR:
trn03021
]
134300323 (ubtf)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
134300323 (ubtf)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
134300323 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
134300323
NCBI-ProteinID:
XP_062841110
LinkDB
All DBs
Position
22:complement(9365651..9402860)
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AA seq
735 aa
AA seq
DB search
MNGDMDSTSKEQAVWAQDDLLKLLDAMKVNLPEKDLTKYKTTETHLNWEKVAFNTYSGEM
CKQKWLEVSREIRKFRTLSELIVDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKR
AKYAKLHPEMSNLDLTKILSKKYRELPERKKEKYVNDFLREKESFEVNMMKFKENHPDLL
ENTGKKGSIVPQKPLTPQQLWYNHEKKAFLKIHPSGTSKDIKESLGRKWTQLPDKKRLKW
ISKSLEQHKQYEETMREFIQQHPQLNLTEDNIVKNTLTKAERQLKDKFDGRPGKPPSNGY
SMFCAELMSGMKDVPSTERMVMCSQRWKLLKQNEKDAYQKRCEQKKKEFEVEMTRYLCSI
SEEEQQRILAEQKMAGFKRGSGNAVKKNVKAKTSPLKPKRPISAMFIFSEEKRPKLQQER
PDLSDNELTRLLARMWNDLTDKKKEKYKNLEAVLKAESEKRSKEEQTKLPDPPKTAQEIW
QHSVIGDYLARFKNDRPKAQKAMEATWNTMEKKEKIVWIKKAAEDQKRYERDLSEMRSPA
TLLASGKKMKFEGEPKKPPSNGYQKFSQEMLSGGELNHLPMKERMTEIGGRWQRLPQKEK
DRYKKIAEEKQKQYKVLHEQWLASLSSQDRATYKEYNSLKRKNPGRAGGSSAKQKAKAKT
SDEEEDDEEEDDDDDDEAEKESEEESSSGEESEEADEDDDDNEDEDDEEAEDKENKSESS
SSASSSEDSSDSESE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagacatggattctacaagtaaagagcaagcagtttgggcccaggatgatttg
ctaaagcttctggatgccatgaaagtaaacctgccagagaaggacctgaccaagtacaag
acaaccgaaacccatctgaactgggagaaggttgcctttaacacgtactctggtgagatg
tgcaaacaaaaatggcttgaggtctcaagagagatccgtaagttccgcacgctgtccgag
ctcatagtggatgcacaagactacatcaagaatccttacaaaggcaaaaaactgaagaaa
catccggactttcccaagaagcctctgacaccatacttccgtttcttcatggaaaagaga
gcaaagtatgcaaagcttcacccagagatgagcaacctggaccttacaaagatcctctca
aagaaatacagagaactgcccgaacgtaaaaaggaaaaatatgtgaatgattttctcaga
gaaaaagaatcttttgaggttaacatgatgaagttcaaggagaaccatccagacctgtta
gagaatactggtaagaaaggctccatcgtgccacagaaaccactgaccccacagcagctg
tggtacaaccacgagaagaaggccttccttaaaattcaccccagcgggaccagtaaagac
atcaaggaaagtctggggaggaagtggacacagctgccagacaaaaagagactaaagtgg
atcagcaaatctctggagcaacataaacagtacgaggagacgatgcgggagtttatccag
cagcacccgcagctaaacctgaccgaagacaacatcgtcaagaacactttgaccaaggcc
gaaagacagctcaaagacaagttcgatggtcggccaggcaaaccaccatcgaacggttac
tcaatgttctgcgccgagctgatgtctggtatgaaagacgttcccagcactgagcgcatg
gtcatgtgcagccagcgttggaaactcctcaaacagaatgaaaaagatgcttatcagaaa
cgctgtgaacagaaaaagaaagaatttgaagtggagatgacccgttatctgtgtagcatc
tcagaggaggagcagcagagaatcttggcagagcagaagatggctggttttaaaaggggc
agcggaaacgctgttaaaaagaacgtaaaagcaaagactagtccattgaagcccaagagg
ccaatctcagccatgttcatcttttctgaggagaagaggccgaagcttcagcaagagagg
cctgacttgtctgacaacgagctcactagactcctggcccgcatgtggaatgaccttact
gataagaagaaggaaaaatacaagaatctggaggctgtgctgaaagcagagtcagagaaa
cgaagcaaagaagagcaaaccaagctgccagacccacccaagactgcacaggaaatttgg
caacacagtgttattggggattacttggccagatttaagaatgaccgaccaaaggcacag
aaagccatggaagccacctggaacacaatggagaagaaggagaagattgtgtggatcaaa
aaggctgcagaggaccagaaaagatacgagagagatctgagtgagatgcgatcccctgct
acattgcttgcctcagggaagaagatgaagtttgaaggggagcccaaaaaaccaccctcg
aacggctatcagaaattctcccaggaaatgctatcgggtggggagctaaaccatctaccc
atgaaggagcgcatgaccgagattggtggccgctggcagaggctcccgcagaaagaaaaa
gatcgctacaagaagatcgcagaggagaaacaaaagcagtacaaagtgctgcacgaacag
tggctagcgagcttatcatctcaagacagagcaacatataaggaatacaattctttgaaa
aggaagaaccccggtagagcaggcggtagcagcgcgaaacaaaaagccaaggccaagacc
tcagacgaggaagaagatgacgaagaagaagatgacgacgacgatgacgaggctgagaag
gagtctgaggaggaatcatccagcggggaggaaagtgaagaagcagatgaggacgacgat
gataacgaagacgaggacgacgaagaagcggaggataaggagaacaaatccgagagcagc
agcagcgcgtccagctcagaggattcatcggactccgaatccgagtga
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integrated database retrieval system
