Trichomycterus rosablanca: 134300900
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Entry
134300900 CDS
T09921
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134300900 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134300900 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134300900 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
trn00535
]
134300900 (col9a2)
Proteoglycans [BR:
trn00535
]
Extracellular matrix (ECM) proteoglycans
Others
134300900 (col9a2)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
134300900
NCBI-ProteinID:
XP_062841431
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Position
2:4523280..4559667
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AA seq
654 aa
AA seq
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MARKFDILQSLVLLQVLCLSLAQVGQKGDPSQPGPDGPPGEDGIDGLIGGKGERGPIGNP
GPKGKPGPTGPAGSAGSGLPGLPGPAGPIGLPGEMGLTAPKGVMGSPGSPGLPGPSGKPG
PPGKFLGSEEGSADFQCPTNCPPGPKGPQGIMGVKGHKGRAGILGAPGSIGRMGAKGEYG
ISGEQGIPGPPGPQGLRGYPGMVGPKGGTGPQGYKGITGPIGLPGVPGKEGPRGPPGDAG
DKGDTGGQGIKGPQGVVGKKGENGLPGIDGKDGTPGIPGIKGASGQNGRPGPPGHQGAAG
LPGSPGLKGAVGDKGESGPRGLSGMPGAPGPQGEPGPPGEAGMEGVPGPKGDRGERGPVG
PQGIAGGPGNNGERGPMGIPGAQGLPGTKGDKGFQGKVGPKGDFGDPGVEGLAGEKGEKG
QSGEPGPKGQQGVRGEQGHNGPTGDPGKPGDKGPTGLSGPRGLSGVRGAPGMPGIQGATG
PDATDQHIIEVVLKMLQERLAALAVSAKRGALGGAGMMGPPGPPGPPGPSGPQGVHGLTG
ARGIPGTIGAPGQIGNSGLKGKRGAKGERGDAGRPHPGLPGPPGLPGPPGLDGVARDGKP
GERGPQGSAGQPGHPGKAGHPGLPGFCEMAACLASSAYTSPRLQEAGTVKGPST
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagttcgacatcctccaaagcttggttctcctgcaggtgctgtgcctgtca
ctagctcaagtgggtcaaaagggagatccaagccagccaggaccagacgggcctcctgga
gaggacggaattgatgggctgattggaggaaaaggtgaaagggggcccattggaaatcct
ggaccaaagggtaaaccaggccctactggcccagcaggatcagccggatctggacttcct
ggactgcctgggccagcaggaccaattgggcttccaggagagatgggactcactgcaccg
aagggagttatgggatcccctggatcaccaggattgccaggaccttcaggaaaacctggg
ccacccggaaagttcttgggttcagaagaaggcagtgctgatttccagtgtcccactaac
tgtccacctgggcctaaaggtcctcaaggaataatgggggtgaagggtcacaagggtcgt
gctggtattctgggagctccaggaagcattggaaggatgggtgcaaaaggagagtatgga
atctctggtgagcaaggaataccaggccctccaggcccacagggtttgagaggctaccca
ggaatggttggacctaaagggggaacaggtcctcaaggttacaaaggcattaccggaccc
atcggccttcctggagtccctggtaaagagggacccagaggtcctcccggagacgctggg
gataaaggtgatactggtggacaaggcattaaaggaccacaaggagtggtgggaaagaaa
ggcgagaatggtctgccagggattgatggcaaagatggtacgcctggtatcccaggaata
aagggagcttcaggacagaatggcagacctggtccacctggccaccagggggcagcaggt
ttgcctggcagccctggcctcaaaggcgctgtgggtgacaagggtgaatcaggacccaga
ggattgtcaggaatgcctggtgctccaggtcctcagggtgaacctggtcctcctggtgaa
gctggtatggagggagttccagggccaaagggtgacaggggtgagagaggacctgttgga
ccacagggaatcgctggcgggcctggaaataatggcgaacgagggccaatgggtatacca
ggagctcagggtcttcctggaaccaagggtgacaagggattccaaggcaaagtgggacca
aagggagactttggtgatccaggagtagagggattggctggagagaagggagagaaggga
cagtctggtgaacctggacctaagggacagcaaggagtaagaggtgaacaaggacacaac
ggtcctaccggagaccctggcaaaccaggagacaagggtcccacaggtctttccggcccc
cgaggtctcagtggagtgagaggtgcaccaggcatgccggggatacaaggagcgactggt
cccgatgccacagatcagcacattattgaggttgtcctgaagatgctgcaagagaggtta
gctgctttagcagtgagcgccaaaaggggagcactgggaggagctggaatgatgggacca
ccaggcccaccaggacctcctgggccttcaggacctcagggagttcacggccttacaggt
gcccgcggcattccaggcacgattggagcaccaggccaaataggaaactcaggtcttaaa
ggaaaaagaggtgcaaagggagaaagaggagatgctggacgacctcacccgggtctacca
ggaccacccggccttccaggtcctccaggtctggatggagtggcacgggatggcaagcca
ggtgaaagagggccacaaggttcagcaggccagcctggccatcctggaaaagcaggtcat
cccggcctacctggtttctgtgaaatggcagcatgcttggcatcctcagcctacacctct
ccacgactccaggaggctggcacagtcaagggaccatccacttaa
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