Trichomycterus rosablanca: 134301302
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Entry
134301302 CDS
T09921
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134301302 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Other domain-containing proteins
Patched domain-containing proteins
134301302 (ptchd1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
134301302
NCBI-ProteinID:
XP_062842023
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Position
23:complement(15566311..15578807)
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AA seq
888 aa
AA seq
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MLRHAVREGLRAFFHNLGHFVANHPVLFASAPVLLSVLLGASFSRYRVEEQVEYLLAPKH
SLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGRVIVTSRRGSVLDPHYVDLVLKLHSA
ITHIQVPMLGFNYTFSHLCLLDNSQNCIVDDILQVLDEIQTAKSSNRSAPLVRYPITRLK
DGREAYIGHQLGGVQTGGSGRDTVRVTRALQLTYYLQVASALNEMVAARWELQFCRELER
FGAAHPELGLHPFTSSTLQRDFQRTSRVSERPLLFSLGACLSLAVLCCSMKDCVRTKPWL
GILALVTVSLATLTSAGIFNLTGGKYNSTYLGIPFVMLGHGLFGTFEMLSSWRRTREDQH
VKERVAAVFSDCMLPFTASTALHLVTFGIGASPFTNIEAVRLFCRIACISVLLNYLYVLA
FYGSNLVFAGYLENNYRHSLFCKRVPKPESLQQKPVWYRFLMYTHYNEEAGEPGELHVYE
THLLVAFMKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNVVAKETSTI
AYTRAQQHYFSSYSPVIGFYIYESIEYWNTSVQEDLLEYSKGFERISWFESYLNYLHGQN
MTTSLPRRNFTEQLRSGFLRQPRYVHFSDDIIFAKRADGDFDVVASRMFLVAKTTENKRE
EMSILLDTLRKLSLTSRVKFIIFNPSFVYMDRYASSVGAPLKNSCIAGLFLLFFSTFLAA
DPLVNAWLTVTVASVEFGLIGFMTLWQVELDCVSVLCLIYGVNYAVDSSAPLISAFVFGR
ESTRTRWVKVSLERHGVPALQSYMCYSAALLPLAAVPSNLTRTLFKCLFLTALITAFHCL
AILPVLLTFLPPSKKKRRKRKNVAENREDIECVEMVDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcacgcggtgcgcgaagggctgcgcgcgttctttcacaatctgggtcacttc
gtcgcaaaccacccggtgctgttcgcctcggcgcccgtgctcctgtccgtgctgctgggc
gccagtttcagcagataccgcgtggaggagcaagtggagtacctgctggcacccaagcac
agcctggccaagatcgagggcaacctggtggatagtctgttccccgtgaaccgctccaag
cacacgctttactcggacctgcagaccccgggccggtacgggcgcgtgattgtcacctcg
cgcagggggagcgtgctcgatccgcactacgttgacctggtcctgaagctccacagtgcc
atcacccacatccaggttcccatgctgggcttcaactacaccttctcccacctctgcctg
ctggacaacagccagaactgcatcgtagacgacatcctccaagtgctggatgagattcaa
acagcgaaatcgtctaatcgcagcgcgccgctcgtacgctaccctatcacgagactcaag
gatggccgcgaggcctacatcgggcaccagctgggcggggttcagaccggcggcagcggc
cgagacaccgtccgcgtcacccgcgccctccagctgacctactatctgcaggtagccagc
gcgctcaacgagatggtagcggcacgctgggagctccagttctgccgggagctggaacgt
ttcggcgcggcgcacccggaactggggcttcacccattcacctcgtccacactgcagaga
gacttccagaggaccagccgggtgtctgagcgcccgctgctgttcagcctgggtgcatgc
ctatcgctggctgtgctgtgctgctcgatgaaggactgtgtacgcaccaagccctggctg
ggcatcctggcgctggtcacggtcagcctggctaccctcacctcggccgggatattcaac
ctcaccggggggaaatacaactccacgtacctcgggattcccttcgtcatgctaggtcac
ggcctgttcggcacattcgagatgctgtcttcctggcgccggacccgagaagaccagcac
gtgaaggaacgagtggcggccgtgttctctgactgcatgctccccttcacagccagcacg
gcccttcacctggtgaccttcggaatcggagccagccccttcaccaacatcgaggcggta
cgtctcttctgccgcatcgcctgcatctctgtgctcttgaactacctctacgtcctggcc
ttctacggctccaaccttgtgttcgccggctaccttgagaacaactatcgccacagcctg
ttttgcaagcgcgtccccaagcccgagtcgctccagcaaaagccggtgtggtaccgcttc
cttatgtacacgcattacaacgaggaggcgggcgaacccggcgagctgcacgtctacgag
acgcacttgctggtggcctttatgaaacgatactattgtgactggattaccaacacttac
gtcaaaccctttgtggtgcttttttacctagtatatatctcgtttgcactgatgggctac
ctgcaagtgagcgagggatcggacctcagtaacgtggtggccaaagagaccagcaccatt
gcctacactagggctcagcaacactacttcagtagttacagtcctgtaattggcttctac
atatacgagtccattgaatactggaataccagcgtgcaggaggacctgctcgagtacagc
aaagggtttgaacggatctcttggttcgagagctacctgaactacctgcacgggcagaac
atgaccaccagcctgccccgcagaaacttcaccgagcaattgcgctcgggcttcctccgg
cagcctcgctacgtgcacttctcggacgacatcattttcgccaagcgagccgacggagac
ttcgacgtcgtggcctcccggatgttcctggtggccaagacgacggaaaacaagcgagag
gagatgtccattctgttggacacgctacgtaagctctcgctgacctccagggtcaagttc
atcatcttcaacccttccttcgtgtacatggaccgctacgcctcgtcggtaggtgcacca
ttgaagaactcgtgcatcgccggtttgttcttgctcttcttttcgacctttctggctgcc
gacccgctcgtgaatgcctggctgactgtcacggtggcctccgtggagtttggcttgata
ggcttcatgaccctgtggcaggtggagctggactgtgtgtcagtgctgtgcctgatctac
ggggtcaactacgcagtggactcgagcgcgcctctgatatcagccttcgtgttcggtagg
gaatcaacacgcacacgatgggtcaaggtgtccttggagcggcacggggtcccggcgctg
cagagttatatgtgttacagcgccgcgctcctgcctctggctgccgtgccgtccaacctc
actcgcacgctattcaagtgtcttttcctgaccgccctcattactgccttccactgtctg
gctatcttgcccgtccttctaaccttcttacctccttccaagaagaagaggagaaagaga
aagaacgtggctgagaaccgggaagatattgagtgcgtagaaatggtggatagtactcga
gtggttgatcagattactaccgtctag
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