Trichomycterus rosablanca: 134301462
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Entry
134301462 CDS
T09921
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
trn
Trichomycterus rosablanca
Pathway
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134301462 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134301462 (slc6a11b)
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134301462 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134301462
NCBI-ProteinID:
XP_062842225
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Position
24:complement(1490102..1511442)
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AA seq
611 aa
AA seq
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MTGEKPVVPVVSMVNGKHGEDVEASQGNTVHERGQWASKVEFMLSVAGEIIGLGNVWRFP
YLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYATQ
VIQAHLNVYYVVILAWAIFYLFNCFARELPWASCGHYWNTENCVDFNNASMANVSNPYAT
SPVIEFWERRVLSISDGIEHAGKLRWELALCLAIAWVICYFCIWKGPKSTGKVVYVTATF
PYFMLVILLIRGITLPGAADGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLTAL
GSYNSYNNNCYRDCVILCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLAFI
AYPKAVTMMPWSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPKTFRVGYRRELLI
LGMSITSFILGLTMLTEGGMYVFQLFDYYAASGMCLLFVAIFESVCIGWVYGGDRFYSNI
EDMIGYKPVFFLKWCWKILTPGICSAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWTMAMS
SMVCIPLGIVVQIWKTKGTFMERIKKLTTPSADLRMRGHVSTKSPYAVNDADAKVRGDGK
LSTITEKEAHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgaaaagccggtggtcccggtggtttccatggtgaacgggaagcatggggag
gacgtggaggcttcgcaggggaacaccgtgcatgagcgcggtcagtgggccagtaaggtg
gagttcatgctgtcggtggctggagagatcatcgggctcgggaacgtgtggaggttccca
tacctctgttacaagaacggaggaggagcgttcttcgtgccttacgtcatcttctttgtg
tgctgtgggatccccgtcttctttttggagacagcgttaggacagttcaccagtgaaggt
ggaatcacatgctggaggaaagtgtgtccactctttgaaggcatcggctatgcaactcag
gtcatccaggctcatcttaacgtttactacgtggttattttggcgtgggcgatcttctac
cttttcaactgcttcgccagggagctgccctgggcctcgtgtggtcactactggaacaca
gaaaactgtgtggatttcaacaatgccagcatggcaaacgtcagcaacccctacgccacc
tcaccggtcatagagttttgggagcgacgcgtgctcagtatatctgatggaatcgagcat
gctgggaagctacgctgggagctggcgctgtgtctcgctatagcctgggtcatctgttac
ttctgcatctggaaaggaccgaaatcaaccggcaaggtggtttacgtgacggcaaccttt
ccatacttcatgctggtgatcctgcttatccgaggaatcacccttcctggtgcagccgat
ggaatcaagttctacctttacccggacatctcacgtctctccgacccacaggtgtgggtt
gatgctggaactcagatctttttctcctacgctatctgtctggggtgtctgaccgctctg
ggtagctataacagctacaataacaactgttacagggactgtgtgatattgtgctgtttg
aacagtggtacgagctttgtggcaggatttgccatcttctctgtgttgggtttcatggcc
tatgagcagaacgtacccatcgaggccgtggcagagtctggaccgggtctggccttcata
gcgtatcctaaagccgttaccatgatgccgtggtctcctctgtgggcctgcctcttcttc
atgatgctcattttcctcggtctcgacagtcagttcgtgtgcgtggagagtctggtgacg
gccgtggtggacatgtaccccaaaacattccgagtgggatatcgcagagagcttctcatc
ttaggaatgtccataacttcgtttattttggggctaacgatgctgactgagggtggaatg
tacgtcttccagttgtttgactattacgctgccagcgggatgtgtttgctcttcgtagcc
atctttgagtccgtctgcatcggctgggtctacggtggtgacagattttattcaaacatc
gaagacatgatcggctacaaacccgtctttttcctcaagtggtgctggaaaatcctcaca
cccgggatctgctccgcaattttccttttcttcctgatcaaatacaaacccctgaaatac
aacaacgtgtacacgtatccagactggggttacggtatcggctggaccatggcgatgtcc
tcgatggtgtgcatccctctgggcatcgtcgttcagatctggaaaacaaaaggaaccttt
atggagagaatcaagaagctgaccaccccgagcgccgatctgaggatgagagggcacgtc
agcaccaagagcccctacgctgtcaacgacgctgatgccaaagtcagaggggatggcaaa
ctctccaccatcacggagaaagaggcgcatttctga
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