Trichomycterus rosablanca: 134302304
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Entry
134302304 CDS
T09921
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134302304 (smc4)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
134302304 (smc4)
Condensin II
134302304 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
THOC7
PspA_IM30
CCDC113_CCDC96_CC
TPR_MLP1_2
Laminin_II
Crescentin
Motif
Other DBs
NCBI-GeneID:
134302304
NCBI-ProteinID:
XP_062843432
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Position
25:complement(3628027..3649455)
Genome browser
AA seq
1295 aa
AA seq
DB search
MPGKTTKSSTAAKPRGKGSQPRDESDDEMNVAPKQTNTEEQESPVTNAADAAGEEVDNRS
LEEILGSIPPPPPPAMTNEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGS
GKSNVIDSMLFVFGYRAQKIRSKKLSVLIHRSDGHQDIQSCTVEVHFQKIVDKEGDDYDV
LPDSKFYVSRTAGKDNSSAYHINSKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAM
MKPKGQTEHDEGMLEYLEDIIGSCRLKNPINTLCRRVELLNEQRGEKLNRVKMVEKEKNG
LEGEKNKAVEFLTLENAMFKKRSQLCQFYVHDLQQRIIEKEAEKQLIQEDTKGLTEKSKQ
LTEEMKEKNEALKNVEKKMGKLTKFIEGQKDKFTQLDLQDVEVREKLKHTKSKTKKLHKQ
IQKDKEKLEEVQNVPASSEKIITEASAQKEVLEKVKVKEEEALAQVMERLKEETSGLQLE
KEENEKKLLELSKAVNETRSQMDVAQSELDIYLSQHNTAVSQLNQAKEALQGSADTLRER
RAAIKELQVKVPNCEQQLKKDEEELKQISEQDGQARTMVHDMRQKVEEAKSSLSTTRSRG
KVLDALMQQKRSGKIPGILGRLGDLGAIDEKYDIAISSSCGALDNIVVDTIDTAQKCVTF
LKTQNIGIATFIGLDKMKVWEKNMGAISTPDNIPRLFDMVKVKDDVVRPAFYFALRDTLV
AKDLEQATKVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSIGTEVTQEQLD
KMERALNEKVVQLQGWQQKKQQLEESVHKLRTELRDMKNTLEKYTASIQSLEEQEIHLKS
QIKQLEANVIAAAPDKAKQKQMEKNLETFKKNFEAASNKAGKVEAEVKRIHTLIVDINSH
KLKAQQDKLDKVNKELDECSSSITKAQVAIKTAGRNLKKAEETVARLEAEIAENEKLMEE
LTEQLKKLEEQAGEIMKSCQEAEEALPEVQEQHRGVLQEIKAIQEQEHALQKELLNVRLK
VEQIDTNITECQNKIKHWEKESTKLALHSIDDKPAEELPKLTPVELEAIKNPDVIKNEIA
LQEERCAQMKPNLGAIAEFKKKEELYLQRVGELDAITTERDNFKMSYEELRKQRLNEFMA
GFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKT
LSSLALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFE
MADRLIGIYKTHNTTKNVGINPKTIVLKNVEVASG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgccaggaaaaacgacaaagagctcgacggctgccaagccccgagggaaagggtcgcag
ccccgggatgagtcggatgatgagatgaacgtagcgcctaaacaaaccaacacagaagag
caggaatcgccagtgactaatgctgcagatgccgctggcgaggaggtggataaccggagc
ctggaggagattctcgggagcatccctccacccccaccccccgccatgaccaacgaaccg
ggcgcacctcgcctcatgatcacgcacatcgtcaatcgcaactttaaatcatacgcaggg
gagcagatcctgggccctttccataagcgcttttcttgcatcatcggcccaaatggcagc
gggaagtccaacgtgatcgactcgatgcttttcgtatttggatacagagcccaaaaaata
agatccaagaagctctcagtgctcattcatcgctcggacgggcaccaggacatccagagc
tgcacagtcgaagtacacttccagaagattgttgacaaggaaggagatgactacgatgtc
ctccctgacagcaagttctatgtttcaagaactgctggtaaagataattcctcagcctat
cacatcaatagcaaaaaggcgacctttaaagatgttggaactttgcttcgtagtcatggc
attgaccttgatcacaaccgattcctcattctacagggggaagtggaacagatcgctatg
atgaagcctaaaggccagacagaacatgacgaaggcatgctagagtacctggaggacatt
attggctcctgccgcctcaaaaatcccatcaacactctatgcagacgagtagagctactc
aatgagcagaggggtgaaaagctgaatcgtgtaaagatggtggagaaggaaaagaacggt
ctggagggtgagaagaacaaagcagtggaatttctcaccttggaaaatgccatgttcaag
aagaggagtcagctttgccagttctatgtgcatgatttgcagcagcgtatcattgaaaag
gaagcagaaaaacaactaatccaggaggacaccaagggactgactgaaaaaagcaagcag
ctcacagaggaaatgaaggagaagaacgaggccctgaagaatgtagagaagaaaatgggc
aagttgaccaagttcattgaaggccagaaggacaagtttacccaactggatctccaggat
gtggaggtgcgtgagaagcttaagcacaccaagagcaagaccaagaaactccacaagcag
atacagaaggataaggagaagttggaggaagtgcagaacgttccagccagcagcgagaag
attatcacagaggcttctgctcagaaggaggtactggagaaggtgaaggtaaaggaggag
gaagctctggcccaggtgatggagcgactgaaggaggagaccagcggccttcagctggag
aaagaggaaaatgagaaaaagcttctcgagctgagtaaagccgtaaacgagactcgttca
caaatggacgttgctcagtcagagctggacatctacctaagtcagcataacacggccgtc
tcacagcttaaccaggctaaggaggccctacaggggtctgccgacacactccgggagagg
cgagctgccattaaggagctacaggtcaaagtgcccaattgtgagcagcagctcaagaag
gatgaagaggagctgaagcagatctccgagcaggatggacaggcccgcacaatggtgcat
gacatgaggcagaaggttgaggaggccaagagctccctgtccaccacccgcagccgaggc
aaagtgctggacgccctcatgcagcagaaacgcagcggcaagatccctggcatactagga
cgtctgggtgaccttggagctattgatgagaagtatgatatcgccatctcgtcaagctgt
ggtgcgcttgacaacattgtagtggacaccattgacacagctcagaaatgtgtcaccttt
ctcaagactcagaatattggcattgccacctttatcggtctagacaagatgaaggtctgg
gagaaaaacatgggtgccatctccacgccagacaacattccacgtttgtttgatatggtg
aaggtgaaggatgatgtcgttcgtcctgccttttactttgctcttagagacacactggtg
gccaaagaccttgagcaggctactaaagtcgccttccagaaagacaaacgctggagagtc
gtcactctgcaaggccagatcatcgaacaggctggcactatgacgggaggaggaggccgt
gtaatgaagggcagaatgggctcttctattggcactgaagtcacacaggaacagttggac
aaaatggaaagagctctgaatgagaaggtggtgcagctgcagggctggcagcaaaagaag
cagcagcttgaggagagtgtgcacaaactaagaaccgagctcagagacatgaagaacacg
ttggagaaatacacagccagcattcagagtcttgaggagcaagagattcacctgaagtct
cagataaagcagttggaagcaaatgttatcgctgctgccccagacaaagctaagcaaaaa
cagatggagaagaacctggagaccttcaagaaaaactttgaggctgcctccaacaaggca
ggaaaggtcgaagctgaggtgaagagaatccacacgctgattgtggacatcaatagccac
aagctgaaggcccagcaggacaaactggataaggtcaacaaagagctggatgaatgttcc
tcttccatcaccaaagcccaagtggcaattaagactgcagggcgtaatttgaagaaggca
gaggagactgtagcacgactggaggctgagatagcagagaatgagaagttaatggaagag
ctgacggagcagctaaaaaagctagaggagcaagcaggagagatcatgaagtcctgccag
gaggctgaggaggcgctgcctgaggtgcaggagcagcatcgtggagtcttgcaggagatc
aaagcgattcaggaacaggagcatgctctgcagaaagagctgctgaacgtccggctgaag
gtggagcagatcgacacgaacatcaccgagtgtcagaataagatcaaacactgggaaaaa
gagtccacaaaactcgctctgcactctattgatgacaaaccagcagaggaattgccaaag
ctaacaccagtggagctggaggccataaagaacccagatgtcatcaaaaacgagattgct
cttcaggaggagcgttgtgcacagatgaagcccaacctgggagctatagccgaattcaag
aagaaggaggagctgtatctgcagagagtgggagagttggacgcgatcaccactgaaaga
gacaacttcaagatgagctacgaggagctgagaaaacagaggctgaacgaattcatggct
ggttttaatatcatcaccaacaagctgaaggagaactaccagatgctgacactaggggga
gatgcagagctggagctggtggacagtctggatcctttctctgaaggcattatgttcagt
gtgcggcctcctaagaagagctggaagaaaatctataacttgtctggtggagagaagact
ctgagttcgttggctctggtctttgcactgcaccacttcaaacccactcctttatacttc
atggatgagatagacgccgcgctggacttcaagaatgtgtccattgtggcctgttatata
tacgaacaaaccaagaacgctcaattcatcatcatctctctgaggaacaacatgtttgag
atggctgaccgactgattggcatctacaagacccacaacaccactaagaatgtgggcatc
aaccccaaaaccatcgtcctgaaaaatgttgaagttgcttcaggatag
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