Trichomycterus rosablanca: 134303016
Help
Entry
134303016 CDS
T09921
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
trn
Trichomycterus rosablanca
Pathway
trn03320
PPAR signaling pathway
trn04120
Ubiquitin mediated proteolysis
trn04137
Mitophagy - animal
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134303016 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134303016 (ubb)
04137 Mitophagy - animal
134303016 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134303016 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134303016 (ubb)
Ubiquitin system [BR:
trn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
134303016 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
134303016
NCBI-ProteinID:
XP_062844330
LinkDB
All DBs
Position
26:11032858..11036544
Genome browser
AA seq
761 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaaaaccctcacaggcaagaccatcaccctcgaggttgagccaagt
gacaccattgagaatgtcaaagccaagatccaggacaaagaaggcattcctcctgaccag
cagaggctgatctttgccggcaaacagctggaagatggtcgcaccctgtccgactacaat
atccagaaagagtccacacttcacctggtgctgcgtctcaggggcggtatgcagatcttc
gtcaaaaccctcacaggcaagaccatcaccctcgaggttgagccaagcgacaccattgaa
aacgtcaaggccaagatccaggacaaagaaggcattccccctgaccagcagaggctgatc
tttgccggcaaacagctggaagacggtcgcaccctgtccgactacaatatccagaaagag
tccacacttcacctggtgctgcgtctcaggggcggtatgcagatcttcgtcaaaaccctc
acaggcaagaccatcactctcgaggttgagccaagcgacaccattgaaaatgtcaaagcc
aagatccaggacaaagaaggcattcctcctgaccagcagaggctgatctttgctggcaaa
cagctggaagatggtcgcaccctgtccgactacaacatccagaaagagtccacacttcac
ctggtgctgcgtctcagaggcggtatgcagatcttcgtcaaaaccctcacaggcaagacc
atcacccttgaggttgagccaagcgacaccattgaaaacgtcaaagccaagatccaggac
aaagaaggcattcctcctgaccagcagaggctgatctttgccggcaaacagctggaagat
ggtcgcaccctgtccgactacaacatccagaaagagtccacacttcacctggtgctgcgt
ctcaggggcggtatgcagatcttcgtcaaaaccctcacaggcaagaccatcactctcgag
gttgagccaagcgacaccattgaaaacgtcaaggccaagatccaggacaaagaaggcatt
cctcctgaccagcagaggctgatctttgccggcaaacagctggaagacggtcgcaccctt
tccgactacaacatccagaaagaatccacacttcacctggtgctgcgtctcaggggcggt
atgcagatcttcgtcaagaccctcacaggcaagaccatcactctcgaggttgagccaagc
gacaccattgaaaacgtcaaagccaagatccaggacaaagaaggcattcctcctgaccag
cagaggctgatctttgccggcaaacagctggaagatggtcgcaccctgtccgactacaac
atccagaaagagtccacacttcacctggtgctgcgtctcaggggcggtatgcagatcttc
gtcaaaaccctcacaggcaagaccatcactctcgaggttgagccaagcgacaccattgaa
aacgtcaaagccaagatccaggacaaagaaggcattcctcctgaccagcagaggctgatc
tttgccggcaaacagctggaagatggtcgcaccctgtccgactacaatatccagaaagag
tccacacttcacctggtgctgcgtctcagaggcggtatgcagatcttcgtcaaaaccctc
acaggcaagaccatcacccttgaggttgagccaagcgacaccattgaaaacgtcaaagcc
aagatccaggacaaagaaggcattcctcctgaccagcagaggctgatctttgccggcaaa
cagctggaagatggtcgcaccctgtccgactacaatatccagaaagagtccacacttcac
ctggtgctgcgtctcagaggcggtatgcagatcttcgtcaaaaccctcacaggcaagacc
atcacccttgaggttgagccaagcgacaccattgaaaacgtcaaagccaagatccaggac
aaagaaggcattcctcctgaccagcagaggctgatctttgccggcaaacagctggaagat
ggtcgcaccctgtccgactacaatatccagaaagagtccacacttcacctggtgctgcgt
ctcagaggcggtatgcagatcttcgtcaaaaccctcacaggcaagaccatcacccttgag
gttgagccaagcgacaccattgaaaacgtcaaagccaagatccaggacaaagaaggcatt
ccccctgaccagcagaggctgatctttgccggcaaacagctggaagatggtcgcaccctg
tccgactacaatatccagaaagagtccacacttcacctggtgctgcgtctcaggggcggg
cagtaa
DBGET
integrated database retrieval system
