Trichomycterus rosablanca: 134309786
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Entry
134309786 CDS
T09921
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134309786 (ift140)
Cilium and associated proteins [BR:
trn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
134309786 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_HPS5
TPR_GEMI5
TPR_COPA_B
ANAPC4_WD40
TPR_IFT80_172
Beta-prop_WDR35_TULP_N
Clathrin
MIOS_WD40
Consortin_N
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
PQQ_3
Motif
Other DBs
NCBI-GeneID:
134309786
NCBI-ProteinID:
XP_062847168
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All DBs
Position
3:complement(23565077..23678398)
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AA seq
1463 aa
AA seq
DB search
MAVYFDHQIDAPDCNGEATRTAWHSTQPLLAVGSVNPASGGCIDIYLQQGEHVELCHVER
AYAPALLRWHPTKTVLAVGWETGETLLLTHPHGEHTPLPNNTHSACITLLEWNCNGTRLI
TGDQAGVLVVWKVDARGRLNGTHLTKQAYNKPLTNCIFRQTPPKEDVAQLAKAAVSGDEE
ALDKFNWKKSSKGGVWSPSTQEGLTIYVSTADGCVYSVDDCGQNVHLLTVEGSVQKLFYS
EHRSILAVITNDLLLSQFNLGPEGGTQEFSKVKLSGRGGQSADIVWTDSGLLITASGENI
IRLWDLEKDDNSVLSLDENMGFEKGELLNCVSYCTAKRVLAAGTTRARVAMWQMVTMTNQ
KGDTRTQWKLQTPIELQGNITQLQWGSSLQLLAVCNSRTVLILSEHVMSSHYRQQVAAVQ
LSPTQLSLNYFSSHTLLQLHTDTQVRAVQVTKDSVIAWDGRSIHVYMNLGQIIRNTASFQ
CDSAALAVHEENIYTVEPNRVQVRTQQGTVKQLLVFTEAEGNPIMLNVCGSYLAVGTDTF
HVKVFDLTRREAKPMCNAKNLAELIPDLGALRSVKCNSSGNQLSILITQVNGRPDHRVYF
YDVELDTLSHFDFFTGRPLSGISPSDDNQRTLHEEAELAGRYPISQFWDESEPCLFACEI
ALVNSEYHTVNQLNANDKVDVLVVTFFVTQEHGLLLQDSQPKPTSLQGLLTLDTPYYYYT
CKPGETYTETASVSPSPAAVPASSNMVVRRALRDFVGLENCEKQTRDAMLNFSFYLTIGD
MDEAFRAIKLIKSEAVWENMARMCVKTRRLDVARVCLGNMGNARAAHALREAEKEPELEA
QVAMLATQLGMLDNAEALYLSCGRFDLLNKFYQARGDWQKAIETAETHDRIHLRSTYYSY
AQHLENTGDKNLALTYYERSDTHRFEVPRMLMEDIVSLEIYINKMKDKILYKWWGHYLES
QSDMESALRYYDYAQDYLSQVRVHCYLGNIQKASEIANETGNRAASYHVARQYEGQDKIS
QSVHFYTRAQAYNNAIRLCKENNMDEQLMNLALLSNPDDMMDTAAYYEERGEHMDRAVML
YHKAGCVSKALELAISTEQLAALQLIAEELNENSDPTMLTRCSDFFIEHKHYSKAVQLLV
AAKKYHEALQLCLDQNLTITEELAESMTISRGSAHLSEKERKELLERIADCCMRQGNYHL
ATKKYTQAGKKTKAMRSLLKSGDTEKIVFFAGVSRQKELYVMAANYLQSLDWRKDPEIMK
TIISFYTKGRALDLLAGFYEACAQVEIDDYQDYEKAFGALTEACKCLTKAKSCHGNETDE
RLAQLTQRLALMRRFIQARSIYEQDPAAALTECESLLDESDLDPAVRVGDVFGFIIEHHC
QNGSYQKAWAKLEELRRVYPSVNVSAYVNQRSLENLQNAIGMRLIQTDATPFNSHHHTHT
KHTLTHSNEEDEEEIEEDEHIID
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttactttgatcaccaaattgatgcaccagactgtaatggggaggcgactcgt
actgcatggcactccactcagcccctattggccgtcggctctgttaatcccgcctctgga
ggctgcatagacatttacctgcaacaaggtgaacatgtggagctgtgtcatgtggagcga
gcatatgcaccagcactgctgcgttggcatccaactaaaacggtgctggctgttggctgg
gagactggagaaactttactactcacacacccacatggagaacacacaccacttccaaat
aacacacactctgcctgcatcacactgctcgaatggaactgcaacggaacaagacttatt
actggagatcaggcaggggttctggttgtgtggaaggtggatgcaagagggagactgaat
ggaactcacttgacaaaacaggcctacaacaaacccctaaccaactgtatcttcagacaa
acacccccaaaagaggatgttgcacagctggcaaaagcagctgtcagtggtgatgaagaa
gctctggataaatttaattggaagaagagcagtaaaggtggagtttggtctcccagcaca
caggaaggacttaccatctatgtcagcactgccgatggctgtgtttacagtgtggatgac
tgtgggcagaatgtgcacttgctgactgtagagggcagcgtgcagaaactcttctactct
gagcacagatccatacttgctgtgattacaaatgatctgctgctctcacagtttaacctt
ggaccagaggggggcacacaggagttcagcaaggtgaagctgagtgggagaggtggacag
agtgcagatattgtgtggactgatagtggtttgttgattacagcatcaggagaaaatatc
atcaggttgtgggatctggagaaagatgataactctgttttatctcttgatgagaatatg
ggctttgagaaaggagagttgctcaactgtgtctcttactgcactgcaaaaagagttctt
gctgcaggaaccactagggcacgtgttgcaatgtggcagatggtgacgatgaccaatcaa
aaaggagatactaggactcagtggaagttacaaacacccattgaactacagggaaatatc
acacagctgcagtggggatcgagtctgcagttgctggctgtgtgtaacagcagaacagtg
ctgatcctctctgaacatgtgatgagttcccattacaggcagcaagtggcagcagtgcag
ctctcaccaacgcagctcagcctgaactatttcagctcacacacacttctccaacttcac
accgacacacaagtccgagctgtacaggtcaccaaggactctgtgatagcatgggatggc
agatctatacatgtgtatatgaatttgggacaaataattcgtaatacagcttctttccag
tgcgattctgctgctctagcagttcatgaggagaacatttacactgtagaaccaaaccga
gtgcaggtccgcacacagcagggtacagtaaagcagctgttggtttttacagaggcagaa
gggaaccccatcatgttgaatgtgtgtggctcgtacctggctgttggaactgatacgttt
cacgtcaaagtatttgacctgacacgcagagaggcaaagccgatgtgtaatgcaaagaac
cttgccgaactgattcctgacctgggagctctgagatcagtcaagtgcaactccagcggc
aaccaacttagcatcttaattacacaggtaaatgggcgtccagatcacagggtgtatttc
tacgatgttgaattagacactctgtctcattttgacttcttcactggtcgacctctcagc
ggaatttcaccatcagacgataaccagaggactctgcatgaggaggcggagcttgcaggt
cgttatccaatctctcagttctgggatgagagtgagccatgcctttttgcatgtgaaatc
gctttggtcaactcagagtaccacactgtcaaccagttaaatgccaatgacaaggttgat
gtgctggtggtgacattttttgtgactcaggagcatggcctcctcctacaggactctcag
cccaaaccaacctctctccagggattactcacactggatacaccgtactactactatacc
tgcaagccaggcgaaacctacactgagactgcttcagtctcgccatctcccgctgcagtt
cccgcctcctccaacatggtagtgcgacgagctctgcgggactttgttggattggagaac
tgtgaaaaacagaccagagatgccatgctgaactttagcttctaccttaccatcggggac
atggacgaagcctttagagcaatcaaactcatcaagagtgaggctgtgtgggagaacatg
gctcgcatgtgtgtcaagacccggcgtctagatgttgcccgggtgtgtctgggtaacatg
ggtaatgctcgggcagcccacgcactcagagaggccgagaaagagccggagctggaggca
caagttgcaatgctggctacacagctgggcatgctggacaatgctgaagctttgtatctt
tcctgtggaaggtttgatcttttaaataagttttatcaggcacgtggtgattggcagaag
gccatcgagacggccgagactcatgatcgcatccatttgcgcagcacctattacagctat
gcccaacacctggagaacactggggacaagaatttagctcttacttattacgagcgctct
gatacacaccggttcgaggttccccgcatgctgatggaggacattgtttccctagagatc
tacatcaacaagatgaaggataaaatcctgtataagtggtggggtcattatctggagagc
cagtcagacatggagtctgcactccgttattatgactatgctcaggactacctgtctcaa
gttcgtgtgcactgctacctgggaaacatccaaaaggcgagtgagatagctaatgagacg
ggcaacagggcagcatcttatcatgtggcccgacagtacgagggtcaggataagatcagc
cagtctgtgcacttctacacccgagcacaggcctataacaatgccatccgcctatgtaaa
gagaacaacatggatgagcagctgatgaacctggcactgctcagcaacccagacgacatg
atggacactgccgcctattacgaggaaagaggagagcacatggaccgggccgtcatgctg
tatcacaaagctggctgtgtatctaaagctctggagttggcgatctctacagagcagctg
gctgcactacagctgattgcagaggagctgaatgagaacagcgaccccaccatgcttacg
cgctgctctgattttttcattgaacacaaacactacagcaaagctgtacagctgctagtg
gctgccaagaagtatcacgaggcactgcagttgtgtttggatcaaaacctgaccatcaca
gaggagctggccgagagcatgacgatatcacgaggttctgcccacctgtcagagaaggaa
cgtaaagagcttctggagcgaatcgcagactgctgcatgcgccagggcaactatcaccta
gcaaccaagaaatatacacaagctggaaaaaagactaaggcaatgcgttccttgctgaaa
tcaggcgatacagagaagatcgttttctttgctggcgtctctcggcagaaggagctctat
gtgatggcagccaattaccttcagtctctggactggaggaaagacccagagatcatgaag
accatcatcagcttctacacgaaaggtcgtgctctagatctgctcgctggattctacgag
gcctgtgcacaggtggagattgatgattatcaggactatgaaaaagctttcggtgctctc
actgaggcctgcaagtgtctaactaaagcaaagagctgccatggaaacgagacggacgaa
cgacttgcacagctcacacagcgacttgcacttatgcggagattcatacaagcacgcagt
atttatgaacaggatccagcagccgctttgactgaatgtgagtctcttttggatgagagt
gatctggatcctgcagtgcgagtgggcgatgtttttggcttcatcattgagcatcactgt
cagaatggcagctatcagaaggcatgggcaaagctggaggaactacggcgtgtgtatccg
tcagtaaacgtgagcgcatatgtaaatcagcgcagtctggagaatttgcagaatgccatc
ggtatgcgactcatacaaactgatgcgacacccttcaacagccaccatcacacacacacc
aaacacacactcacacacagcaatgaagaggatgaggaggagatagaggaggatgaacat
atcatcgactga
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integrated database retrieval system
