Trichomycterus rosablanca: 134316207
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Entry
134316207 CDS
T09921
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134316207 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134316207 (rad54l)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
134316207 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
134316207
NCBI-ProteinID:
XP_062852600
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Position
6:complement(4024789..4035068)
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AA seq
745 aa
AA seq
DB search
MRRSLAPSQLAKKKQREDSSDDDDDDWRTEITPKRKKGERDCRESYISPYRKPLTQLTNR
PVCVDSNEHEAFIRSILSRPFKIPIPNYTGSLGIRALGLKRVGVRKSLHDPFEDGALVLY
EPPALGPHDVIKADKDKMPVHVVVDPVLSKVLRPHQREGVKFLWECVTGRRIPDSYGCIM
ADEMGLGKTLQCITLVWTLLRQSPDFKPEIDKAIVVSPSSLVRNWYNEVAKWLGGRVHPV
AIDGGSKNEIDRKLVNFISQQGLRVPTPILIISYETFRLHSEVLHKGKVGLVICDEGHRL
KNSDNQTYQALNAMNAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPI
LKGRDADASDKDRAVGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQK
ELYKLFLKQAKPVETLQQQQGKISVSSLSSITSLKKLCNHPSLIYEKCVVGDEGFAGAME
LFPPGYSTKGVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRARKYL
YVRLDGTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN
DEQAMARVWRDGQRKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLE
ELKELFTLNEDTLSDTHDRFRCQRCVNGRQVRPPPEDSDCTSNLSCWQHSADKRGLNDAV
LQASWDKAVSFVFHQNSHHDQRGVV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaagtctggcacccagtcagctggcaaaaaagaagcagagagaagattcatct
gatgatgatgatgatgactggcggactgaaattacacctaaaagaaagaaaggagagcga
gactgcagagaaagttatatatctccatacaggaaacctctgacgcagcttacaaaccga
cctgtgtgtgtggacagcaacgaacatgaagcctttatccgcagtattctttcaaggccg
ttcaagattcccatcccaaattacacaggttcattagggatacgagctctgggattgaag
cgggttggtgtgaggaagtctctacatgatccgtttgaagacggcgctttggttctgtac
gaaccgccggctctgggtcctcatgacgtcatcaaagcagacaaggataagatgcctgta
catgttgtggtggatccggtgctcagtaaagtcctacgaccacatcagagagagggtgtg
aagtttttgtgggagtgcgtgacggggcgacgcatccccgactcgtacggctgcatcatg
gcagacgagatggggctgggaaagacgttgcagtgcatcacgctcgtgtggacgctgctc
agacaaagccctgatttcaaaccagagatcgacaaggccatcgtggtttctccttctagc
cttgttaggaactggtacaacgaagtggccaagtggctcggaggacgtgtgcaccctgtg
gctatcgacggtggatccaaaaacgagatcgaccgcaagcttgtgaacttcatttcccag
caaggcctgagagttcccactcccatcctgatcatttcatatgagacgtttcgtctccac
tctgaagtcctgcacaaaggaaaagtcggattggtcatttgtgacgagggtcacaggctg
aaaaactctgataatcagacgtaccaggctctgaatgccatgaatgcccagcggagagtc
ctgatctctggcacgcccattcagaacgacctgctggagtacttcagcctggtgcacttc
gtcaatgcaggaatcctcggaacagctcaggaattcaagaaacgttttgagatacccatc
ctgaagggtcgagacgcagacgctagtgataaagatcgtgctgtcggggaggagaagctc
aaagagctcatcagcatcgtaaacaggtgtttgatcaggaggacgtcggatattctgtcc
aagtatctacctgtgaagatcgagcaagtggtgtgctgcaggctgactcctctgcagaag
gagctctataagcttttcctgaagcaggccaagccagtcgagactctgcagcagcagcaa
ggaaagatcagcgtttcctctctgtcctccatcacctctctcaagaaactctgtaaccac
ccgtctctgatctatgagaagtgtgtggtgggagatgaaggatttgctggagcgatggag
ctttttccaccaggttactccactaaaggagttgaaccgcagctctcaggtaaaatgttg
gtgctggactatattctggccatgaccaggacgacgaccagcgataaagtggtgctggtg
tccaactacacccaaactctggatctgttcgagaaactgtgtcgagctcgcaaatacctg
tatgtgagactggatggaaccatgtccatcaagaagagagccaaaattgttgaaagattt
aacagtccgtctaacccagagtttatcttcatgttgagcagtaaggctggcggctgtggc
cttaacctgatcggtgcaaatcggctggtgatgttcgatccggattggaatccggccaac
gatgagcaggcgatggcacgagtgtggcgcgatggacagagaaaaacctgctacatctac
agactgttgtcgacggggactatagaggagaagattctgcagaggcaggcccataagaaa
gctctaagcagctgcgtggtggatgaggagcaggacgtggagagacatttttctctggag
gaactgaaggagctcttcactctcaatgaggacacacttagtgatacacacgacaggttt
cgatgtcagagatgtgtaaacgggcgtcaggtccgcccccctcctgaggattcggattgc
accagcaatctgtcctgttggcagcactccgctgataaacgaggactgaatgatgctgta
cttcaggcttcctgggataaagccgtgtccttcgtctttcaccagaactctcaccacgat
cagagaggtgtcgtctag
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