Trichomycterus rosablanca: 134316901
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Entry
134316901 CDS
T09921
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134316901 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134316901 (stau1)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134316901 (stau1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
134316901 (stau1)
mRNA cycle factors
Stress granule specific factors
134316901 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
134316901
NCBI-ProteinID:
XP_062853505
LinkDB
All DBs
Position
6:complement(13105808..13119729)
Genome browser
AA seq
698 aa
AA seq
DB search
MSQLQFQSSGNPVSSSTPVQLPQPQPGLSIPSPTGSLPSESASHPLRNSALPSASATPFC
NPTATNMANPKEKTPMCLVNELARYNKIQPEYKLLSEQGPAHSKIFTVRLTLGEQHWDAE
GTSIKKAQHSAASSALTQTTLPKPSSRVPRHHSRNPGGFYRGSEYSMTHTVELNALCMKL
GKKPIYKLIDPYQGMRPPLPYNVRAPGPYARSMQQYYYPFPPVAPVLYHIELSIGGQQFH
GKGRTRQAAKHDAAAKAVKSLQKEPLLQQLAEINQEPEEENLNKSEVSQVFEIALKRNMP
VNFEVLKEAGPPHMKSFVVKVIVGEFTGEGEGKSKKIAKKLAAIAVLEELRKLPQLPVID
KMPPRIKKKTKSIIKLQTNPEYGQGINPISRLAQIQQAKKEKEPEYILVLERGLPRRREF
VMQVSVAGQTAEGMGPNKKVAKRNAAEKMLELLGFKVPQPQPSKPALKTDEKIPPKKPGD
GRKVTFFEPGSGEEGSLVPKEEDFRLPFHSHQPLPAGILPMVPEVAQAVGANQGLHIKDY
GRPNQAKASVTATIANELLYAGTSHTAEGILKENKNLAQRSHGPFTRPSEQLAYLATAQG
LQVEYTDFPKNNKNEFVSLINCSTQPPLMSHGIGKDIESCHDMAAFNILKLLSELDQQSA
DRPANGPISGCGKQELEGDLLLKPANSNTMGKSLDGTV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcttcagttccagtcttctggcaatcctgtgtccagctctacccctgtacag
ctgccacagcctcaacccgggttaagcattccctctcccactggctctttaccttcagag
agtgccagtcatccactacgaaactctgccctgccttctgcttctgccacacccttttgc
aaccccacagcaactaacatggcaaaccctaaagagaagacccccatgtgtctggtgaat
gagttagcccgttataataagatccagcctgagtacaagctactcagtgagcaaggacca
gctcattccaagatattcacagtgcggttaactctgggtgaacagcactgggatgcagag
ggcaccagcataaaaaaagctcagcactctgcagcatcctctgctctcacccagaccacg
ctgcccaaacccagcagcagagtccctcgccaccacagcaggaacccaggtgggttctac
agaggatcagagtatagcatgacgcacactgtggagctgaacgcactttgtatgaagctg
gggaaaaaaccaatctataaacttatagacccataccaggggatgagacctccactgccc
tacaatgtcagagcaccggggccatatgcccgctccatgcaacagtattactacccattt
cctcctgtggcgccggtgctgtatcatatagagctgtccattggagggcagcagtttcat
ggaaaaggccgcactcgccaggctgctaaacatgatgctgctgctaaagctgttaaatct
ttgcaaaaagagccactgctccagcagttagctgagataaatcaagaacctgaagaagaa
aaccttaacaaatctgaggttagccaagtgtttgaaattgcactgaagcggaacatgcct
gtgaactttgaggtgctgaaagaagcaggaccccctcatatgaagagcttcgtggtcaaa
gtgattgtaggagagttcacaggagaaggggagggcaagagcaagaagattgccaagaaa
ctggctgccattgctgttctggaggagttgcggaagctgccacagctgcctgtaatagac
aagatgccaccccgcattaaaaagaaaaccaagtctattataaagctgcagaccaatcca
gaatatggccaaggcatcaacccaattagcagattggctcagatccagcaggccaagaaa
gagaaagagccagagtacatccttgtgctggagagaggactgcctcggcgtagggagttt
gtcatgcaggtgtcagttgctgggcagactgcggagggcatgggccctaataagaaggtg
gccaagcgtaacgctgctgagaagatgctggaactcctggggtttaaagtgcctcagcct
cagccttccaaacctgcattaaaaactgatgagaagatccctccaaaaaaacctggagat
gggcgtaaagtgaccttttttgagccaggctctggggaggagggaagtcttgttccaaag
gaggaagacttccgtctgccctttcacagccatcagccgctccctgctggcattttacct
atggtacctgaggttgcacaagcggttggtgccaaccaaggacttcacatcaaggactat
ggccgccccaaccaggctaaagcctcagttacagctacgattgccaatgagctgctttat
gctggcacgtcccacacggctgagggcatactgaaggaaaacaaaaacctggctcaaaga
tcccacggacccttcactaggccatccgaacagcttgcctacctagccactgctcaaggg
ctacaggtggagtacacagattttcctaagaacaacaaaaacgagtttgtgtctttgatc
aactgctcaactcagccgcctctgatgagccatggcattggaaaggatatagagtcttgt
catgacatggctgcatttaacatcctgaagctgctctcagagttggaccagcagtctgct
gatcgtccagccaacggaccaatttctgggtgtggaaaacaagagcttgaaggcgacttg
ctgctcaaaccggctaactcaaacaccatgggaaaaagtctggacggcactgtctag
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