KEGG   Trichomycterus rosablanca: 134316968
Entry
134316968         CDS       T09921                                 
Symbol
sdc4
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
trn  Trichomycterus rosablanca
Pathway
trn04512  ECM-receptor interaction
trn04514  Cell adhesion molecule (CAM) interaction
trn04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:trn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134316968 (sdc4)
   04514 Cell adhesion molecule (CAM) interaction
    134316968 (sdc4)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134316968 (sdc4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:trn00535]
    134316968 (sdc4)
Proteoglycans [BR:trn00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   134316968 (sdc4)
SSDB
Motif
Pfam: Syndecan Holin_BhlA
Other DBs
NCBI-GeneID: 134316968
NCBI-ProteinID: XP_062853625
LinkDB
Position
6:23277096..23289082
AA seq 205 aa
MLKAYLALVLLAAAAFAESVRETETWMPIKPGRSHDDLVSSGDFGFPDEVSPTPYDEEDD
DDDDDDDVDYDKEDYDYFSGSGDEDVLFDKDLKEMAEPEEFDNSIPDIIPSAKPLPTEDS
NDIIAVRNNEIAYDPSVSQSHTGEHNIFKKTEVLAAVIAGGAVGLLFAVLLILLLVYRMK
KKDEGSYDLGKKPIYKKAPTAEIYA
NT seq 618 nt   +upstreamnt  +downstreamnt
atgctaaaagcttacctcgctttggttttactggctgctgctgcctttgccgaatcggta
cgagagacagaaacgtggatgccaataaagcctgggcgttcacatgacgaccttgtttcc
tctggcgattttggatttccagacgaagttagccctacaccttatgatgaggaggacgat
gacgacgatgatgatgatgatgttgattacgacaaagaagactatgattacttttcagga
tctggtgatgaagatgtacttttcgataaagacctaaaagagatggccgagcctgaagag
tttgataacagcatcccagacatcataccatcagctaagcctctgccaacagaagattct
aatgacatcatagcagtgaggaataatgagattgcttacgatcccagtgtctctcagtca
cacacaggagaacataacatctttaaaaagacagaagttctagcagctgttattgctggt
ggtgctgttgggttgctgtttgctgtgctgctcatcctcctccttgtctaccgaatgaag
aaaaaagatgaaggcagctatgacttgggcaagaaacctatatacaaaaaggctcccact
gccgagatctacgcatga

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