Trichomycterus rosablanca: 134319135
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Entry
134319135 CDS
T09921
Symbol
usb1
Name
(RefSeq) U6 snRNA phosphodiesterase 1 isoform X1
KO
K23093
U6 snRNA phosphodiesterase [EC:3.1.4.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134319135 (usb1)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
134319135 (usb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HVSL
Motif
Other DBs
NCBI-GeneID:
134319135
NCBI-ProteinID:
XP_062856218
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Position
8:complement(37453943..37461176)
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AA seq
282 aa
AA seq
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MLVNYSSSSDEENEVAGQHRKRKRKNNGKDVSPSQMKRVQGQHKANAMREENSDQASAHL
PLPVSVLEMFRDEEEQHVDDASLHGGRVRSFHHERGNWATYVYLPYEPEDIFLELLDELR
VCAAARGINLNNAEEFHLSLSKTVVLRHHWIQPFVQSLRAGLTPCSRFVCLADKLKVYSN
HEKTRTFLGMEVSTGHAQLHELVKRVDETMEEFTLSTFYKDPSFHVSLAWCIGDFTEQLQ
DACLSELQSVVDGHDDGPFQIKLNCNELRCKTGNKVFLFQLQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttagttaattacagcagcagttcggatgaggaaaatgaagtcgcaggtcaacacagg
aagcgaaaaaggaaaaataatggtaaagatgtgagtccctctcaaatgaaaagggttcaa
ggtcaacacaaagcaaatgcaatgagagaagaaaactcagatcaggcatctgctcatctt
cctttgcctgtcagcgtgttggagatgtttagagatgaagaagagcagcatgtagatgat
gcttcactacatggaggaagagtgagatcattccaccacgagagaggaaactgggctact
tatgtctacctgccatacgaaccagaagacatattcttggagttgctggatgagctgaga
gtttgtgcggcagctcgtggcatcaacctaaacaatgcagaagagtttcacttaagcctc
tccaagactgtggtcctgcgccatcactggatccagccgtttgtgcagtccctacgcgct
ggactgacaccatgcagcagatttgtgtgtctagcagataaactgaaggtctactccaat
cacgaaaaaacaagaacctttcttggcatggaagtctctacaggtcacgcacagctgcac
gagctggtaaaaagagtagacgagaccatggaggagttcactctcagcactttctacaag
gatccatcgtttcatgtaagcctggcctggtgcattggagatttcactgaacagctgcag
gatgcgtgtttatcagagttgcagagcgtcgtggacggtcatgacgacggacctttccag
ataaaactgaactgcaacgagctgcgctgcaaaacaggaaataaagtctttcttttccag
cttcagtga
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