Trichomycterus rosablanca: 134324581
Help
Entry
134324581 CDS
T09921
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134324581 (smarcal1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134324581 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
134324581
NCBI-ProteinID:
XP_062862545
LinkDB
All DBs
Position
12:complement(815232..833174)
Genome browser
AA seq
879 aa
AA seq
DB search
MSSSSTLTPEQQRKIEENRQRALARRAQRLAQGHQPPVHPVPAPSKPYRPPRTHPTGGNA
KYKPIFPVPKPAANSAAPAKRTQLIDPLPIPKWTASASASAPSTSLEPPKPRPDAAVSSE
PKSTGTVGSFYGQGGVKPFPQGSEKPTPKPFEASGSAVPAKKPAVSVRGKCVLHSDQRFR
VEVSYHAELINVFKSIPSRSYDPASKMWNFSLQDYEHLMEEASGLPSVSLKPLEGTEGLD
LSSSGSRPKDAAALAALIKLCQGWQKPGALVKGRCTLVSRSRLEVDVTYNADVISAFKQM
PSKNYDMKTRKWSFLLEDYGKLMEALNDISAVEIEPLPRAVVQALSSQFEKTGTRPDEIP
EADLSGVDPVLTRSLMPFQQHGVNFAVSREGRLLLADDMGLGKTVQAICIAAHYRTEWPL
LIVTPSSVRFTWAEAIRRWLPSVSADRINVVVTGKDRLRSGLVNIISYDLLSKTGKQDGA
AQFGVLIMDESHFLKNSKTARCRAALPLLKAAKRVILLSGTPAMSRPAELYTQIQAVRPT
LFPRFHDFGVRYCDAKQLPWGWDYSGSSNLAELKLLLEECLMLRRLKSDVLSQLPAKQRK
VVTVTTDGINSRTKAALTAAAKELAKGCRNKMQEKEALLVFFNHTAEAKIRAIMEYISDM
LECGRDKFLVFAHHKRVLDSISKELADKGIGYIRIDGSTPSAERQQLCERFQFSGKSCVA
VLSITAANMGLTLHAADLVVFAELFWNPGILIQAEDRVHRIGQTRCVEIHYLVAKGTADD
YLWPMIQEKMNVLEQVGLCESNISDKAECASFHSKDPKQRRITEMFERSFSEEDMDESVL
LEAVSDWEDADHTHSASHQNHQVSESPSKKRLIEDYFSK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagcagcactttgactccagagcagcagaggaagattgaagagaacagacag
agggcactggccaggagggcacagagactggcacaggggcaccaaccaccagtccaccct
gtacctgcaccatccaaaccataccgaccccctcggacccatccaacaggaggaaatgcc
aagtacaagcccatctttcctgtccccaaacctgcagccaacagtgcagctcctgcaaaa
cggacgcagctcatagatccgcttcccattccgaaatggaccgcttcagcttcagcttca
gctccttcaaccagtctcgaaccccccaagcccagacctgatgccgctgtgtcctccgaa
cccaagtccaccgggacggtggggagcttttatggacagggaggcgtgaagcccttccct
cagggttcagagaagcccacacccaaaccgttcgaagcgtccggctcggctgtacctgcc
aagaagccggcggtcagtgtgagaggaaagtgtgtacttcattctgaccagcgcttcaga
gtggaggtcagctaccacgcagagctcatcaacgtgtttaagagcattccgtccagaagc
tacgatccagccagtaagatgtggaacttcagccttcaggactatgaacatctgatggag
gaagcatccggtctcccctcggtgtctttaaaacctctggaggggacggagggtttggat
ctgtcgtcctccggctctcggcccaaagacgcggcggccctggcggccttgataaagctg
tgccagggttggcagaagccgggcgctctggtgaagggcagatgcaccctggtctctcgc
tcccgtctggaagtggacgtcacgtataatgcagatgtgatcagcgcgtttaaacagatg
ccctccaaaaattacgatatgaaaacaagaaagtggagcttcctgctggaggattatgga
aagctgatggaggctctgaacgacatttcggcggtggagatcgaacccttaccgcgtgct
gtggtccaggccctctcctcccagtttgagaagacgggaacgagacccgatgaaatcccg
gaggccgatctctcgggcgtcgacccggtcctcacgcgcagcctcatgcccttccagcag
cacggcgtcaactttgcagtgtccagagaaggccggctgctcctggctgatgatatgggt
ttgggtaagacggtgcaggccatctgtatcgcagctcactacaggacagagtggccgctg
ctgatagtcacgccatcgtctgtccgcttcacgtgggccgaggcgatccggcgctggctg
ccctcggtatcggcagaccgcattaacgtggtggtgacggggaaggaccgcctccgctcc
gggctggtcaacatcatcagctacgacctgctcagcaagacgggcaagcaggacggggcc
gctcagtttggagtgctcattatggatgaatcccacttcctgaagaacagtaagacggct
cggtgcagggccgctctccctctgctaaaggctgctaagcgagtgatcctgctctcgggg
acccccgccatgtcccggccggccgagctctacacccagattcaggctgtgagacccacg
ctgttccctcgcttccacgacttcggagtgcgctattgtgacgctaagcagctcccgtgg
ggttgggactactcgggctcctctaacctggccgagctgaagctgctgttggaggagtgt
ctcatgctgaggcggctgaagtccgacgtgctctcgcagctccccgccaagcagcggaaa
gtcgtcacggtcaccacagatggcatcaactcgcgaaccaaagctgccctcactgccgca
gccaaagagctcgccaagggatgccgcaataagatgcaggagaaggaggcgctgctggtc
ttcttcaaccacacagcagaagccaagatcagggcaatcatggagtacatatcggacatg
ctggagtgcgggcgtgacaagttcttggtgttcgctcatcacaaacgggtcctggacagc
ataagtaaagaactcgctgataagggaatcggctatatccgtatcgacggctccacgccc
tcggccgagcggcagcagctgtgcgagaggttccagttctcggggaagagctgcgtggcc
gtgctctccatcaccgccgccaacatgggcctgacgctgcacgccgccgacctggtggtg
ttcgccgagctcttctggaacccagggatattgatccaggctgaggaccgagtgcaccga
atcggtcagacacggtgtgtggaaattcactacctggtagctaaaggcacggccgatgat
tacctgtggcccatgatccaggagaagatgaacgtcctggagcaggtcggcctgtgcgag
tccaacatttcggacaaggcggagtgcgctagctttcacagcaaggaccctaagcagcgg
cgcatcaccgagatgttcgagaggtcattctctgaggaggacatggacgaatcggtgctg
ctggaagccgtgagcgactgggaggacgccgaccacacccactcagccagccatcagaac
caccaggtctctgagagccccagcaagaaacggctcatcgaggattatttcagcaaataa
DBGET
integrated database retrieval system
