Trichomycterus rosablanca: 134326121
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Entry
134326121 CDS
T09921
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
trn
Trichomycterus rosablanca
Pathway
trn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134326121 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134326121 (exosc9)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134326121 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
134326121
NCBI-ProteinID:
XP_062864402
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All DBs
Position
14:35306348..35314677
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AA seq
391 aa
AA seq
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MKETPLSNCERLFLLSAIKEKKRLDGRQTYDYRNIKVTFGTDFGCCTVSLGKTRVLAQAS
CELVPPKDSRPTEGLVFFNLELSPMASPSFQSSRQSELLVMLNRQLERCLRNSRCIDTES
LCVISGEKVWQIRVDVHVLNHDGNLMDAASVAAISALCHFKRPDVAIQGREVTVFSAEER
DPIPLSVYHMPICVSFAFFQQGTYLLVDPCEKEELVMDGLLVIAMNKHREICSVQSSGGI
MLLKDQVLRCSRIASVKVSEITELINKALENDKRVRKEGGKFGFAESTPEDRVTVSKKDE
TPVETTGVQETAEEIVSNAEAPPETVSSPVIVATGTGQVGEGLQSTWGLEDEEEDMETGV
DGPKKEDADVMVISDSEEEEVVILSKSGLND
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaactccgctgtccaactgcgagcgactgtttttactcagcgccattaaagag
aagaagcgcttagatggaagacaaacctacgactaccgcaatataaaagtcacgtttgga
accgattttggatgctgtacagtcagtctgggtaaaacaagggttctggctcaggcgtcg
tgtgagctggtccctccgaaagactcccgtcccaccgagggtctcgtgttcttcaacctg
gagctttcacccatggcgtcgccctccttccaatccagcagacagtcggagctgctggtg
atgctgaacaggcagctggagagatgtctgaggaactccaggtgtatcgacacggagtcg
ctgtgtgtcatctcaggagaaaaggtctggcagatccgtgtggacgttcacgtcctgaac
cacgacggaaacctgatggacgcggcgagcgtggccgccatatccgccctctgtcacttc
aagagacccgacgtggccatccagggtcgcgaggtcaccgtgttcagcgcagaagagagg
gatcccattccactaagtgtttatcacatgcccatctgtgtgagcttcgccttcttccag
cagggcacgtatctgctggtggatccgtgtgagaaggaggagctggtgatggacggcctg
ttggtcatcgccatgaacaaacacagagagatctgctccgtccagtccagcgggggcatc
atgctgctcaaggaccaggttctgaggtgcagcaggatcgccagtgtgaaagtgtccgaa
atcaccgagctcatcaacaaagccttggaaaacgacaagcgggtcaggaaggaaggcggg
aagttcggcttcgcggagtccacgcccgaggacagggtcaccgtctcgaagaaggacgag
acccccgtggagacgaccggcgtccaggagacggcggaggagatcgtcagcaacgccgaa
gctcctcctgaaaccgtctcatctcccgtgatcgtcgccacgggaaccggacaggtagga
gagggactgcagagcacgtggggtctggaggacgaagaggaggacatggagaccggcgta
gacggtccaaagaaggaagacgcagacgtgatggtcatctcagacagcgaagaagaggaa
gtcgtgattctgtctaaaagtggactgaatgactga
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