| Entry |
|
|---|
| Symbol |
exosc1
|
|---|
| Name |
(RefSeq) exosome complex component CSL4 isoform X1
|
|---|
| KO |
| K07573 | exosome complex component CSL4 |
|
|---|
| Organism |
trn Trichomycterus rosablanca
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:trn00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134328308 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:trn03019]
134328308 (exosc1)
Messenger RNA biogenesis [BR:trn03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134328308 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
134328308 (exosc1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
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| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
15:complement(32094742..32098949)
|
|---|
| AA seq |
280 aa
MQKVDWLFYFASSAQLPPCSQCSQLVFPNGKAKLVNRRMSDQYQYKHSIFSVSVHSQESD
HMSCTPVAPVHRNTRVLKVRFSIGAVISGDRTRRQGERLCSGDDCTPGTGAYLRHGSVFA
SLAGYVLRRNEGEELPVISVVKETEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPL
KDRFRGTIRKEDVRATEKDKVETYKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVV
AHSEAGVQMVPVSWCEMQCPRTHNKEFRKVARVQPEYLQA |
|---|
| NT seq |
843 nt +upstreamnt +downstreamnt
atgcagaaggtggattggcttttctactttgcctcaagtgcacaacttccaccctgctcc
cagtgttcccagctggtgttcccaaatggaaaagccaaactagtaaacagaaggatgtca
gaccagtatcagtataaacattccatcttcagtgtttcggttcattcacaggaaagcgat
cacatgtcctgcacccctgtagcacctgttcacaggaacacacgcgttcttaaggttcgt
ttttcgatcggagctgtgatttctggcgacaggacgcggaggcaaggtgaaaggctgtgc
agcggggacgactgcacccccggcacgggggcgtacctccgacacggctccgtcttcgcc
tctctggccgggtacgtgctccggaggaacgagggcgaggagctcccggtgatctcggtg
gtgaaggaaacggaggcgcagttactgccggacgtgggcgccatcgtcacctgtaaggtg
acgagtataaacccgcgcttcgctaaggtgcacatcctgtacgtgggctccacgcccctc
aaagaccggttcagaggcaccataaggaaagaagacgtacgagcgacggagaaggacaag
gtggagacctacaagagcttccgaccgggcgacatcgtcctggccaaagtgatctcgttg
ggcgacgtgcagtccaactacctgctgaccacggcggagaacgagctgggcgtggtcgtg
gcccacagcgaggccggggtgcagatggtgcccgtcagctggtgcgagatgcagtgccct
cgcacccacaacaaggagttccgcaaggtggcgcgggtgcagccggagtacctgcaggcc
tag |
|---|
