Trichomycterus rosablanca: 134330091
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Entry
134330091 CDS
T09921
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134330091 (siah2l)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134330091 (siah2l)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
134330091 (siah2l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Arabinose_bd
Motif
Other DBs
NCBI-GeneID:
134330091
NCBI-ProteinID:
XP_062867115
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All DBs
Position
16:18192326..18224724
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AA seq
320 aa
AA seq
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MSRPSSAGGAAGGLGAGKVGGNKHGGSAAAAVGGGAAAAAAGVVTGSVAGSVPAVAAVAL
PHSALAGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCPTCRGPLTPSI
RNLAMEKVASTLPFPCKYASGGCLLSLHHSEKPEHEEICEFRPYTCPCPGASCKWQGSLE
AVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLVLEKQEKYEGH
QQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTS
IAHLFADNGNLGINVTISMC
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctcggctggtggagcggcggggggactcggagccggtaaagtagga
ggaaataaacacggaggctcggcggcagcagcggtaggaggaggagcggcggcggcagca
gcaggcgtagttacgggctcggtagccggttcggttcccgcagtggccgccgtggcttta
ccgcactcggcgttagccggccagtctgccgagctcactgcgctgttcgagtgcccggtc
tgcttcgactacgtgcttccacctattctacagtgccaggctgggcacctagtgtgtaac
caatgtcgccagaagctaagctgctgcccgacctgtcgcggcccgctcaccccgagcatc
aggaacttggccatggagaaagtggcgtccacactgccctttccttgcaagtatgcctcg
gggggttgcctgttatcgctgcaccacagtgaaaagccagagcacgaggagatctgcgag
tttcgcccgtacacctgcccctgtcctggtgcctcctgcaaatggcagggctcactggag
gcagtcatgccccacctcatgcacgcccacaaatccatcaccacgctgcagggtgaagac
atcgtcttcctggccacggacatcaacctgcccggtgccgtggactgggtcatgatgcag
tcttgcttcggccaccacttcatgctggtgctggagaaacaagagaagtacgaaggccac
cagcagttcttcgccatcgtgcttctcataggtactcgcaagcaagccgaaaacttcgcc
taccgcctcgagctgaacggcaaccgcagacggttgacgtgggaagccacgccgcgatcg
attcacgacggggtggccgcagcgatcatgaacagtgactgtcttgtctttgacacctcc
attgcccatctttttgcagacaatggcaacttgggtatcaatgttaccatttccatgtgt
tga
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