Trichomycterus rosablanca: 134332191
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Entry
134332191 CDS
T09921
Symbol
ubc
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
trn
Trichomycterus rosablanca
Pathway
trn03320
PPAR signaling pathway
trn04120
Ubiquitin mediated proteolysis
trn04137
Mitophagy - animal
trn04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134332191 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134332191 (ubc)
04137 Mitophagy - animal
134332191 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
134332191 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134332191 (ubc)
Ubiquitin system [BR:
trn04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
134332191 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
134332191
NCBI-ProteinID:
XP_062869796
LinkDB
All DBs
Position
18:18427441..18428814
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccttgactggcaagaccatcacccttgaggtggagcccagt
gacaccattgaaaatgtgaaggctaaaattcaggacaaggaaggcattcctcctgaccaa
cagcgtctgatctttgctggtaaacagttggaagatggccgcaccctctctgactataac
attcaaaaagagtccacccttcatcttgtcctacgtcttagaggaggcatgcagattttt
gtgaagaccttgactggcaagaccattacactggaggtagagcccagtgataccattgag
aatgtcaaggccaagattcaggacaaggaaggcattcctcctgaccaacagcgtctgatc
tttgctggtaagcagctggaggatggacgcaccctctctgactataacatccaaaaggag
tccaccctgcatcttgttcttcgtcttagaggaggcatgcagatctttgtgaagaccttg
actggaaaaacaatcactctagaggtagagcccagtgataccattgagaatgtcaaggcc
aagattcaggacaaggaaggcattcctcctgaccaacagcgtctgatctttgctggtaag
cagctggaggatggacgcaccctctctgactataacatccaaaaggagtccaccctgcat
cttgtacttcgtcttagaggaggcatgcagatctttgtgaagaccttgactggaaaaaca
atcactttagaggtagagcccagtgataccattgagaatgtcaaggccaagattcaggac
aaggaaggcattcctcctgaccaacagcgtctgatctttgctggtaagcagctggaggat
ggacgcaccctctctgactataacattcaaaaagagtccacccttcatcttgtcctacgt
cttagaggaggcatgcagatttttgtgaagaccttgactggcaagaccattacactggag
gtagagcccagtgataccattgagaatgtcaaggccaagattcaggataaggaaggcatt
cctcctgaccaacagcgtctgatctttgctggtaagcagctggaggatggacgcaccctc
tctgactataacatccaaaaggagtccaccctgcatcttgttcttcgtcttagaggaggc
atgcagatctttgtgaagaccttgactggaaaaacaatcactctagaggtagagcccagt
gataccattgagaatgtcaaggccaagattcaggacaaggaaggcattcctcctgaccaa
cagcgtctgatctttgctggtaagcagctggaggatggacgcaccctgtctgactacaac
atccaaaaggagtccaccctgcatcttgttttgcgtcttcgtggaggaaactaa
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integrated database retrieval system
