Trichomycterus rosablanca: 134334427
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Entry
134334427 CDS
T09921
Symbol
mindy4b
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134334427 (mindy4b)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134334427 (mindy4b)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
134334427 (mindy4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
134334427
NCBI-ProteinID:
XP_062872800
LinkDB
All DBs
Position
20:12355585..12367557
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AA seq
492 aa
AA seq
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MEGNFRRSGVEITKQFGQFDGIMCDNEHQCNSQMHVAPAMADFDRLLQTIRALKPSRLSY
IELLQEEVKRRQSRPLKADEETEDVSRCPSAHSPNGHANQLMVPYSVPRALAVSPSLGGL
PVSPELAMNLRKILFGNALHVFNYEWKKSFFKFREPHSNLSYALETDRGGVRAIQMAVQA
HIVKYLLFTQPSSSECCGIESLTAIGEKEQERALAAAIADILWTAGEESTATVSLVTPER
CFTPHLDYKLDNFTERLQLFTFKKKEDLRTFLYGHIQCFNEEGSHGVILFLYSLVFSRSI
IMLQEDLDSTTTHLLQCSLGNFGCRQALLNLLLTGRASPNVFNGNMYCDEHGSSMSRPLH
GVLSRSDVGYLYWSREEAEHASLPKVGSMLKTPKLPIWVCSINGTYSVLFSLNRSLLSDW
KMEHLFHLYFYNGQPTQASTAMLTIDTHSHHWEAKSGDSQGDPERRFPSVEMTIRTKWEG
AVIDWNRTVPFF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaattttcgacgctcgggggttgaaattacaaaacagtttggacaatttgat
ggaattatgtgtgacaatgaacatcagtgcaatagccagatgcatgtagcccccgcgatg
gccgattttgatcggctgctccagaccatcagggctctgaagccttccaggctcagttac
attgagcttctgcaggaggaggtgaagagaagacagagcagacctctaaaagctgacgaa
gagactgaagatgtttctaggtgtccttccgctcattcacccaacggtcacgctaaccag
ctaatggtgccctactctgtcccccgtgctcttgcagtctctcccagtctgggtggactt
ccagtgtcacctgaacttgctatgaatctgaggaagattttgtttggaaacgcacttcac
gtctttaactacgagtggaaaaaatcattcttcaagttccgggagccacattcaaacctc
tcctacgctctggagacagatagaggtggagttcgtgctattcagatggcagtccaggct
cacattgtcaaatacctacttttcacacagccttcaagctcagagtgctgtggaatagaa
agtttaactgcgattggggagaaagagcaggagagggctttagcggcagccatagctgat
attttatggacagctggtgaggagagtacagccaccgtctccttggtcacgccagaacgc
tgcttcaccccccacctggactacaaactggacaactttacagagcggttgcaacttttt
actttcaaaaagaaagaagatttgaggacgttcctgtatggacatattcaatgttttaat
gaggagggaagccacggagtcattctctttctgtacagcctggtcttctcaagatccatt
ataatgttgcaagaagacttggattccaccactactcatctcctacagtgtagcttgggc
aactttggttgtcgacaggctcttttaaaccttttgttgacgggtcgtgccagtcctaac
gtcttcaacggaaatatgtattgtgacgagcatggcagctcaatgtcacgtcctctccac
ggagttctgtcccgcagtgatgtggggtacctatactggagtcgagaggaagccgaacat
gccagtctgcccaaggtgggaagtatgcttaagacacccaaactgcctatttgggtttgc
agcatcaacggcacctacagtgttttgttcagtcttaatcgatctctcctctctgactgg
aagatggagcatctcttccacctctacttctacaacggccaaccaactcaagccagtact
gcaatgctcaccatagacacacattcccatcactgggaggctaagagcggggacagtcaa
ggagacccagagagaaggttcccctctgtggagatgaccatcagaactaaatgggaggga
gctgtaatcgactggaatagaactgttccctttttttga
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