Thermomicrobium roseum: trd_0443
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Entry
trd_0443 CDS
T00845
Name
(GenBank) chaperone clpB 1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
tro
Thermomicrobium roseum
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tro03110
]
trd_0443
Chaperones and folding catalysts [BR:
tro03110
]
Heat shock proteins
HSP100
trd_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
NBD_SMAX1
AAA_14
AAA_23
nSTAND3
IstB_IS21
ATPase_2
T2SSE
AAA_28
AAA_7
Zeta_toxin
RuvB_N
bpMoxR
Mg_chelatase
NACHT
AAA_18
AAA_3
AAA_19
DNA_pol3_delta2
AAA_25
Torsin
NET2A
KIF9
Motif
Other DBs
NCBI-ProteinID:
ACM06295
UniProt:
B9KY98
LinkDB
All DBs
Position
439167..441779
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AA seq
870 aa
AA seq
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MGRPQFTEKAQEALVTAQRTAAERQNSQLDVEHLLYALVTQHDGVVPQVLLRLQLDPRRV
AQELERVLETLPRLQYAAEPTISPVLRRVLERAQSEAQSFGDQYISTEHLLLAALDAAPR
SPAVQALARLGVQRERVLEALSQIRGAQRVTSPNPESTYQALERYGRDLTALARQGKLDP
VIGRDDEIRRVIQVLLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPEGLRDKRIVQ
LDLAAMLAGAKYRGEFEERLKAVLDEIRASEGEIIVFIDEVHTVVGAGAAEGAMDAANML
KPMLARGELHAIGATTLDEYRKHIEKDPALERRFQPVFVDEPSVEDTISILRGLRERYEL
HHKVRILDSALVAAAVLSHRYITNRFLPDKAIDLVDEAAARLRMEITSMPAELDELTRRI
TQLEIEREALRKERDEASRQRLAELERELANLREQEQVLRSQWEQERQALERINALKEQI
EQTRIEIEQALRAADYTRASELQYGRLVELERQLREEERRLADVQRQGRLLKEEVDADDI
AEIVSKWTGIPVAKLMEGEMEKLVHMEERLHERVVGQDEAVRAVSNAIRRARAGLQDPNR
PLGSFIFLGPTGVGKTELARALAEFLFDDERAMVRIDMSEYQERHTVSRLIGAPPGYVGY
EEGGQLTEAVRRRPYSVVLFDEIEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIM
TSNLGSEYIQALLPHREEEAYERVMQAVRAHFRPEFLNRIDEIIMFRPLTREQLSQIVDI
QLRQVRQRLKQRNITLQVTLRAKEWLAERGYDPVYGARPLKRVIQRELLDPLANMLLRGE
VRDGETVLVDVDEHGNLSIRSMLAEAEVVA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgggacgaccgcaattcaccgaaaaggctcaagaggcattggtgacagcgcagcggacg
gccgctgagcggcaaaacagtcagctcgatgtcgaacatctcctgtatgcgctggtgacc
cagcatgatggtgtcgtaccgcaggtcttgttgcgcctgcagctcgacccgcgccgcgtt
gcgcaggagctcgaacgggttttggaaacgttgccgcgcctgcaatacgccgctgagccg
acgatctcaccggtgctgcggcgtgtcctggagcgtgcccaaagcgaagcccagagtttc
ggtgaccaatacatcagtaccgaacacttgttgctcgctgcgctggatgcggccccgcgg
tcgccagctgttcaggcgttggcgcgattgggcgtccagcgtgagcgggtgctggaagct
ttgagccagatccgcggcgcacagcgggtgacgtctcccaacccagagtcgacctaccag
gcgctggaacggtatggccgtgacctcacagcactggcgcggcagggtaagctcgacccg
gttatcggtcgcgacgatgagatccgccgcgtcatccaggtgctgctgcggcgtaccaag
aacaacccggtcctgatcggtgaacccggcgtgggcaagactgcgatcgtggaagggttg
gcccagcggatcgtgcggggtgacgtaccagagggattgcgcgataagcggatcgtccag
ctcgacctcgcggcgatgctcgctggtgcgaagtaccgaggcgagttcgaggagcgcctg
aaggcagtgctcgacgagatccgtgcctcggaaggcgagatcatcgtcttcatcgacgag
gtccacacggtggttggtgcgggagcagccgaaggcgcgatggacgcggccaacatgctg
aagccgatgctggcgcgtggagaactccacgcgatcggtgcgacgacgctcgacgagtat
cgaaagcatatcgagaaggatcccgcgttggagcgtcggttccagccggtctttgtcgat
gagccgtcggtcgaggatacgatcagcatcctgcgtggcttgcgggagcgctacgaactt
caccacaaggtgcggatcctcgattcggcgctggtcgcggcggcagtcctttcgcaccgg
tacatcacgaaccggtttctgccggacaaggcgatcgacctcgtggacgaggcagctgct
cgtctgcggatggagatcaccagtatgccggcggaactggacgagctgacgcggcggatc
acccagctcgagatcgagcgtgaagcgttgcgcaaagagcgagacgaagcatcccgccag
cgtttggccgaactggagcgggagttggccaatctgcgcgagcaggagcaggtcctccgc
tcgcagtgggagcaagagcgccaggcgctggagcggatcaacgcgctcaaagagcagatc
gagcagacgcgcatcgagatcgaacaagcgctgcgcgcggcggattacacgcgtgcctcg
gagctccagtatggacggttggtcgagttggagcggcagttgcgcgaggaggagcggcga
ctcgccgacgtgcagcgccagggtcggctgctcaaggaagaggtcgatgccgacgatatc
gcggagatcgtgagcaagtggacgggtattccggtcgccaagctgatggaaggcgagatg
gagaagctcgtccatatggaagagcggttgcacgagcgtgtcgtcggtcaagacgaggcg
gtgcgggccgtctccaatgcgattcgacgggcgcgggctggtctacaggatccgaaccgt
ccgctcggaagcttcatcttcctcggcccgaccggggttggcaagacggagttggcgcgg
gctctcgccgagttcctgttcgacgacgagcgggcgatggtacggatcgacatgtcggag
tatcaggagcggcacacggtgtcgcgcttgatcggtgccccgcctggctatgtgggctac
gaagaaggcggccagttgacggaggcagtgcggcggcgaccgtattcggtggtccttttc
gatgagatcgaaaaggctcatccggaagtcttcaatgttctcctccaggtactggacgat
ggccggctgaccgacgggcaggggcgaaccgtcgatttccgaaacacggtcatcatcatg
accagcaacctggggtcggagtacattcaggcgctgctcccgcaccgtgaggaagaagcg
tacgagcgggtgatgcaggcggtgcgagcacacttccggccggagttcctcaaccggatc
gacgagatcatcatgttccggccgctgacgcgcgagcagctctcgcagatcgtggacatc
cagttgcggcaggtgcgtcagcgcttgaagcagcgcaatatcacgctgcaggtcacgctc
cgggcgaaggagtggctggctgagcgaggctacgatccggtctacggagctcgcccgctc
aagcgggtgatccagcgcgaactcctggacccgttggcgaacatgctcctgcgcggtgag
gtgcgggacggcgaaacggtactggtcgacgtggacgagcacggcaacttgagcatccgc
tccatgttggctgaagcggaggtcgtcgcttga
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