Triplophysa rosa: 130546985
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Entry
130546985 CDS
T09216
Symbol
tia1l
Name
(RefSeq) cytotoxic granule-associated RNA binding protein 1, like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130546985 (tia1l)
03041 Spliceosome [BR:
tros03041
]
130546985 (tia1l)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130546985 (tia1l)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130546985 (tia1l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_10
Calcipressin
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
130546985
NCBI-ProteinID:
XP_057178569
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Position
LG2:26924751..26930886
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AA seq
344 aa
AA seq
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MMMMMMDEDQPKTLYVGNLSRDVTEALILQVFSQIGPCKSCKMIIDTAGNDPYCFVEFYE
NRHAAAALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAF
APFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKP
SAPKPNNETSSKHLSYEEVLNQSSPSNCTVYCGGIASGLSDQLMRQTFSPFGQIMEIRVF
PEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWGKETADMRSMQQMQMPQQNKPTY
AAQPYGQWGQSYGNGQQMGQYMPNGWQVPTYGVYGQAWNQQGYK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatggacgaggaccagcccaagacattgtatgtcgggaacctctcc
agagacgttacggaggccctcatcctgcaagtgttctcccagatcggtccctgcaaaagc
tgtaaaatgataattgatacggctggaaacgacccgtactgctttgtggagttctatgag
aacagacacgctgctgcagcactggctgccatgaatggcaggaagatcttaggaaaggat
atgaaagttaactgggcctcgacgccaagcagtcagaagaaagacacaagcaatcatttc
catgtgtttgttggtgacctgagtccagaaatctcgacagatgatgtcagagcagccttt
gctccatttggaaagatatctgatgctcgtgtggtgaaggatctggctacaggaaaatct
aaaggatatggttttatctccttcattaataaatgggacgcagagagtgccattcagcaa
atgaacggccaatggctgggtggaagacagatcagaacaaactgggccacaaggaagcca
tccgctcccaaaccaaataatgaaaccagcagcaaacacttgtcctatgaggaggttctg
aaccagtcaagtccaagtaactgcactgtgtattgtggtggaattgcttctggcctttca
gatcagctgatgagacagactttctccccattcgggcagataatggagatcagggtcttc
ccagaaaaaggctactcatttgtgaggtttgactctcacgagggtgccgcccatgccata
gtgtccgtaaatgggacctgcattgagggccacactgtgaaatgctactggggcaaagaa
accgctgatatgagatccatgcaacagatgcagatgccccagcagaataaaccgacctat
gcggcccagccttacggacaatggggccagtcatacggcaacggtcagcagatgggtcag
tacatgcccaacggttggcaggtgcccacttacggcgtctacggccaggcctggaatcaa
cagggatataaataa
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