Triplophysa rosa: 130548323
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Entry
130548323 CDS
T09216
Symbol
capn2b
Name
(RefSeq) calpain 2, (m/II) large subunit b
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
tros
Triplophysa rosa
Pathway
tros04141
Protein processing in endoplasmic reticulum
tros04210
Apoptosis
tros04217
Necroptosis
tros04218
Cellular senescence
tros04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130548323 (capn2b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130548323 (capn2b)
04217 Necroptosis
130548323 (capn2b)
04218 Cellular senescence
130548323 (capn2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130548323 (capn2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tros01002
]
130548323 (capn2b)
Enzymes [BR:
tros01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
130548323 (capn2b)
Peptidases and inhibitors [BR:
tros01002
]
Cysteine peptidases
Family C2: calpain family
130548323 (capn2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
130548323
NCBI-ProteinID:
XP_057181005
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All DBs
Position
LG25:6884782..6897551
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AA seq
698 aa
AA seq
DB search
MSGVASALAKKRAQAAGFGTNANANKYLNQDFEALRRQCQSNGTLFTDPTFPAAPESLGF
KELGASSHKTRGTEWKRPGELCSKPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEDV
LARVVPSGQDFVNNYAGIFHFQFWQFGEWVDVVIDDRLPAKNGELLFVHSAEGNEFWSAL
LEKAYAKVNGCYEALSGGSTSEGFEDFTGGIAENYDLSKAPPNMFQIIKKALEAGALVGC
SIDITSAADSEAVTRQKLVKGHAYSLTGATEVNYRGQKEKLIRMRNPWGQVEWTGAWSDN
SSEWNSVDPSERPNNRAEDGEFWMSFSEFLRNYSRIEICTLTPDTITSDSVKHWAVNNYD
GTWRKGSTAGGCRNNAYTFWMNPQYVIKLNEEDDDPDDNEVGCSFVIGLIQKNRRRLRKA
GEDMHTVGFAIYELPSQFHGQRDVHLDKNFFLTHAQKARSETFINLREVCTRFKLPPGEY
LIVPSTYEPHKDGDFCLRVFSEKQTETLPCDDPVEADLPDETVSDAEVDSGFRGLFTKLA
GADMEISATELQTILNKIIAKRNDIKTDGFSMETCRTMVNLMDGSSNGKLGLGEFATLWK
KVQRYLGIYKKTDMDDSGTMSTPEMRMALKEAGFCLNNTIYQQLVARYAETDMTIDFDNF
VACLMRLEMMFRIFKTLDPHQTGFIELDFQQWLNFTMV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggagtagcatctgccctggcaaagaagagagcgcaggctgcgggcttcggaaca
aacgccaatgccaataaatatctgaaccaagactttgaggcgctcaggaggcaatgccag
agcaacgggaccctgttcacagacccgactttcccagccgcacccgaatctctgggcttt
aaagaactcggagctagctctcacaaaaccagaggaacagaatggaaaagaccaggggag
ctgtgctcaaaacctcaattcattattggtggagctacaagaacggatatttgtcaagga
gcactaggtgactgctggctgctagcggccatagcctctctgactctaaatgaagatgtt
ttggcaagagtggtgcccagcgggcaggattttgttaacaactatgcaggaatcttccat
tttcagttttggcagtttggcgagtgggtggatgttgtcattgatgaccggctgccggcg
aaaaacggagagctgctgtttgttcactccgcagaggggaacgagttctggagcgccctg
ttggagaaagcctatgctaaagtaaatggctgttatgaagctctgtctggaggttctacc
agtgagggctttgaggatttcaccgggggcatcgctgagaactacgatctgagtaaagcg
ccccccaacatgtttcagatcatcaagaaagccctggaggctggagctttagtgggatgc
tccattgatatcacaagcgctgctgattcagaagctgtcactcgccagaagctggtgaaa
ggccacgcctactctcttacaggggctactgaggtgaactatcgcgggcaaaaggagaag
ctgatccgtatgcggaacccctggggtcaggtggagtggaccggggcttggagtgacaat
tcatctgaatggaacagtgtggatccatcagagcggccaaacaacagagctgaggacggc
gaattctggatgtccttctcagaattcctacggaattattctcgtatagagatctgcacg
ctgaccccagacaccattacgagtgattctgtaaaacactgggcggttaataactacgac
ggcacatggagaaaaggctccactgctggtggctgccgaaataatgcttacacattctgg
atgaatcctcagtatgtgattaaactgaatgaggaggatgatgatccagatgataatgag
gtgggctgtagttttgttattggactgattcagaagaaccggcggcgcctccggaaagcc
ggggaggacatgcacactgtcggcttcgctatctacgagttaccttcacagtttcacggt
cagagggacgtgcacctggataagaatttcttcttgacgcatgcacagaaagctcgctct
gagactttcattaacctgagagaggtatgcacgcgcttcaaactgcctcctggagagtac
ctcatcgtaccatccacctatgaaccccacaaggacggagacttctgcctgcgcgtgttt
tccgaaaaacagactgagacactaccatgtgatgaccctgtggaggccgacttaccggat
gagaccgtgtcggatgctgaggttgattctggcttcaggggtctgttcacaaaactagcc
ggagctgacatggaaatctcagccacagagctacagaccattttaaacaaaataatcgca
aaacgaaatgacataaaaacagatggctttagtatggagacgtgtcgaaccatggtgaac
ctcatggacggcagcagcaatgggaaacttggtctgggagagtttgctaccctttggaag
aaagtgcagagatatctcggaatctataagaagactgacatggatgattctgggaccatg
agcactccggagatgcgtatggcgcttaaggaagccggtttctgtcttaataacactatc
tatcagcaactggtggcacgttatgctgagacagatatgaccatagactttgataacttt
gtggcctgcctcatgcgtctggagatgatgttccggattttcaagacacttgatccccac
caaactggcttcattgagcttgactttcagcagtggctgaacttcaccatggtttaa
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