KEGG   Triplophysa rosa: 130556746
Entry
130556746         CDS       T09216                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
tros  Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:tros00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tros04812]
    130556746 (katnb1)
Cytoskeleton proteins [BR:tros04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     130556746 (katnb1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Katanin_con80 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_VPS8 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st eIF2A PROPPIN Tricorn_2nd Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_ACSF4 WD_LRWD1 Ge1_WD40 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_pof12 Tricorn_N
Other DBs
NCBI-GeneID: 130556746
NCBI-ProteinID: XP_057193996
LinkDB
Position
LG1:complement(29260147..29267866)
AA seq 691 aa
MALTNTTITSWKLQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLT
GHTSPVECIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKANISSLDFHPMGEYL
ASGSVDSNIKLWDVRRKGCVFRYKGHSQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGK
MITEFTSHTSAVNVVQFHPNEYLLASGSADRSVKLWDLEKFNMIGSSEAETGAVRSILFN
PDGSCLYSGSENTLRVYGWEPDRCFDVVHVGWGKVADLAISNNQMIAVSNSQTNVSWYVV
DLNRVKKSGSVIQGLIQDKPIPVPTSALGTTLRRNYERPTTSCSGQEMKQSSEADRRSPE
GERRSPSSEDEKDDKESSAEITNHEDFKEIFQPRSVISRTPPKKTEPFPAPLEHSFSESV
LEKPGPTVKIVTPVIDRAGQLKAPIISSTPVQRVEPTVITAARPVVTTSVPSPSRPVVTI
TKPKPGPGIILSTRNEPIGLNAGDFLSHARNSKASVMGDEEALAQIRKGHDTMCVMLTSR
YKNLDTVRSVWASGDVKISLDSAVSMNDLSIVVDILNIINLKPSLWKLDLCTSILPQIEE
LLQSKYESYVQTGCTSLKLILKRFWPLISDTLTAPPSVGVDITREERHQKCKACYKQLKN
LSNVVKNRAEQVGRHGSTFKELQLLMAPLDY
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggctcttaccaacaccactataacatcctggaaattgcaggagattgtggctcactcc
agcaatgtgtcctcactggtgctggggaaatcatctggtcgtctgctggccacaggtggc
gaggactgcagagtcaatatctgggcagtcagcaaacctaactgcatcatgagtttgacg
ggccacaccagtcctgtggaatgcattcagtttaacagttctgaagagcgtgtggtggcg
ggctctctgtccggttccctgcggctctgggatttggaggctgctaaaattcttcgcact
ctgatgggccacaaggccaatataagcagtctggatttccaccctatgggagagtacttg
gcgtctggatctgtggatagtaatattaagctatgggatgtaagaaggaaaggatgtgtg
tttcgatataagggtcattcccaggccgtgcgctgtctagcctttagtcctgatgggaaa
tggcttgcctcggccagtgatgacagcacagtaaagctgtgggatcttatagccggcaaa
atgatcacagaattcacatcacacacatcagcagtcaatgttgtgcagttccacccgaat
gagtacctgctcgcatctgggagtgcagatcggagcgtaaagctgtgggacctggagaag
tttaacatgattggttcttcagaggccgagacgggagctgtgagaagtatattgtttaat
cctgacggcagctgcttgtacagcggctctgagaacacgctacgagtgtacggttgggag
ccggaccgctgctttgatgtcgttcatgtaggctggggcaaagtggctgatctggccatc
agcaataaccaaatgattgcagtgtcgaacagtcaaactaatgtgagctggtatgttgtg
gatctcaaccgagttaagaagtcaggatctgtgattcaagggctgattcaggacaagccg
attccagtgcccacatctgcactgggaactacgcttcgcagaaattatgagcgaccaact
acatcctgctctggacaagagatgaagcagagttcagaggccgatcgccgcagtccagaa
ggtgagcggagaagtcccagtagtgaggatgagaaagacgataaagagagcagtgcagaa
atcacaaaccatgaagatttcaaagaaatttttcagcctaggagtgtcatctcacggacg
cctccaaaaaagacggaacctttcccagcacccctagagcattctttctctgagagtgta
ctagagaagcccggacctacagtcaagatcgtaactccagttatagacagagcaggacag
ttaaaagctcccatcatctcctctactccagttcaaagagtggaacctactgtaatcact
gctgcacgtcccgtggttaccacatctgtgccctctccatctcgtcctgtggttaccatc
accaaacctaaacccggaccaggaatcatcctgtcaacacgcaatgagcccattggcctt
aatgccggggacttcctttctcatgcacgaaacagtaaagccagtgtgatgggagatgaa
gaggcattagcacagatcaggaaggggcatgacaccatgtgcgtaatgctgaccagtcga
tacaaaaacctggacacagtacgctcagtctgggccagtggcgatgttaagatttccctg
gattctgctgtttctatgaatgacctctctattgtggtggacatccttaacataattaat
cttaaaccatctctgtggaagttggacctgtgcacttctatactaccacagattgaggaa
ttgctgcagagcaagtatgaaagttacgtgcagactggttgtacctctttgaagttgatt
cttaagcgtttttggccgttgatctcggacacactgactgcccctccttctgtaggtgtg
gacattacacgagaggagaggcatcagaaatgtaaagcgtgctataagcagctaaagaac
cttagtaatgtggtgaagaaccgggcggagcaagtcggtcgtcatggcagcacttttaaa
gagctacaactacttatggccccactggactactga

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