Triplophysa rosa: 130564201
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Entry
130564201 CDS
T09216
Symbol
cdx4
Name
(RefSeq) homeobox protein CDX-4
KO
K09312
homeobox protein CDX1/4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130564201 (cdx4)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130564201 (cdx4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
YdaS_toxin
DUF7645
MS_C
Motif
Other DBs
NCBI-GeneID:
130564201
NCBI-ProteinID:
XP_057206126
LinkDB
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Position
LG13:complement(12513327..12515982)
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AA seq
271 aa
AA seq
DB search
MYVGYLLDKEGNMYHQGPVRRSGISIPPQNFVSTPQYSDFTGYHHVPNMDSHAQSAGAWG
APYGAPREDWGAYSLGPPNTISAPMSNSSPGQVSYCSPDYNAMHGPGSAVLPPPPENLSV
GQLSPERERRNSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITIRR
KSELAANLGLSERQVKIWFQNRRAKERKLMKKKLGQSDGSGGSVHSDPGSVSPLPVPGSL
SPSDMHGSLYPPPGMNALPPMRNIQQVTVTQ
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtacgttggataccttttggataaagagggaaacatgtatcaccaaggacctgtgcga
cgatctggcatcagtattccaccacagaattttgtttccacacctcagtattcagatttt
acaggatatcatcatgtgccaaacatggacagtcacgcacagtcagcaggggcatggggc
gctccttatggcgcaccgagagaggactggggcgcgtacagcctcggacctccaaacaca
atttctgcacctatgagcaattcatcaccgggacaagtttcctattgctcgcctgattat
aacgccatgcatggtccggggtcagcagtgttaccgccaccacctgaaaacctttctgtg
ggtcaactttcccccgagagggaaaggcgtaattcctatcagtggatgagcaaaactgtc
cagtcgtcatcaaccggcaaaacgagaacgaaggaaaaatatcgagttgtatacacagac
caccagaggctggagctggagaaagaatttcatttcaatcgctacatcacaatcagaaga
aaatcagaactggccgcaaaccttgggctttcagagagacaggtgaagatctggttccaa
aaccgcagagctaaggaaaggaaattaatgaaaaagaaattgggtcagtctgacgggagt
ggaggatcagtccacagcgacccaggttccgtcagtcccctaccggtaccaggctcactg
agtccatcagatatgcacggttctctctacccacccccaggaatgaacgccttaccacct
atgaggaacatacagcaagttacagtcactcagtga
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