Triplophysa rosa: 130567998
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Entry
130567998 CDS
T09216
Symbol
traf1
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
tros
Triplophysa rosa
Pathway
tros04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130567998 (traf1)
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF3_RING
TRAF2_zf
Sina_ZnF
Not3
zf-C3HC4
zf-C3HC4_4
zf-TRAF_2
ATG16
DUF5798
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130567998
NCBI-ProteinID:
XP_057212571
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Position
LG17:19209985..19216005
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AA seq
547 aa
AA seq
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MASGSEPSINGGSSIPGENEYPSGFPQSICDEVPKEKFLCSNCNNVLNKARQTVCGHRYC
LACVNWLLRNNKDLVCTKCKEDQSIESDTSVLTLDQFFNDAAINKEILDLKVHCANQGCP
WRSTLKNFEDHQSQCEYALIPCNIGCGIMVQRKTLATHLERGCPNNKTACTSCSGILTLR
ELKKHVCPSSVDKKTGKAEKRQKNNPLGSSKKKEPCVFSEVGCPFKGNADKVKEHESCSH
VGHLQLLLEVIRGLKCNLSSQERGVPENLDFLQPGQTGSSLVSHEENELETDGGESGVND
KASSLHDDQAELAVGQQLDTLQQRVQVMENIISALNREVEKTQISVVSLERDNLNNQQII
QHLETKVEEQQQWLVRKDIHITSLQQCISGLQDVSYDGTFLWPLCDVTQRLREAATGHKI
SQYSPAFYTARYGFKVCMRLYLNGDGVGKGTHISLFFVIMKGEYDGILQWPFRHKVTFFL
IDQNQREHVIDAFRPDLCSASFHQPVSEMNVASGCPLFFPLGKLRSPKHAYCKDDTIYIK
CVVDTSS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggatcagagccgtcgataaacgggggttcatccatcccgggtgaaaacgaa
tacccgtcgggcttccctcagagcatctgtgatgaggtcccgaaagagaagtttttgtgc
agtaactgtaataatgtgctgaataaagcgcgtcaaacggtgtgcggtcaccgctactgc
ctggcgtgcgtcaactggctgcttagaaacaacaaagaccttgtgtgcacgaaatgtaaa
gaggatcagagcattgaaagtgatactagtgtactgacacttgaccaatttttcaatgat
gcggctattaataaggaaattttggacctgaaagttcactgcgctaaccagggctgcccg
tggagaagcaccctgaaaaactttgaggaccatcagagtcagtgtgaatatgccctgatt
ccttgtaacattggctgtggcattatggttcagaggaaaacactggccacacatctggaa
agaggttgccctaacaacaagactgcatgtacctcttgctcaggcatcctgacacttaga
gagctcaaaaagcacgtatgccccagctcagtcgacaagaagacgggcaaagcagaaaaa
cggcaaaagaataatcctctgggcagctccaaaaagaaagagccatgtgttttctcagaa
gttggttgtccctttaagggtaatgcagacaaagtcaaagaacatgagtcatgcagtcac
gtgggccatctgcagcttctcttggaggtcatcaggggtcttaagtgcaacttaagttcc
caagagaggggcgtccctgaaaaccttgactttcttcagcctggacagactggatcttct
cttgtttctcatgaggagaatgagctcgagacagatggcggagagtctggagtcaatgat
aaggcttccagcctccatgacgaccaggctgaacttgccgtggggcagcaactggacacc
ctgcagcagagagtgcaggtcatggagaacatcatctcagctttgaaccgagaggtggag
aagacacagatcagtgtggtttcactggagagagacaacctcaataatcagcagatcatt
cagcacctggaaaccaaggtagaggagcaacagcagtggcttgtcagaaaggacattcac
attacctccttacagcagtgcatcagcggactgcaggatgtctcgtatgatggcaccttt
ctctggcccttgtgcgatgtcacacagagactgagagaagcagcgactggccacaagatc
agtcagtactcaccagctttctacactgccaggtatggatttaaagtatgtatgcggctt
tatctaaacggagatggagttggaaaggggacacacatctctcttttctttgttataatg
aaaggagaatatgacggcattcttcaatggccattccgacacaaggtaacgttctttctc
atagatcagaaccagagggagcatgtcatcgatgctttccgtccagacctctgttctgca
tccttccaccaacccgtctcagagatgaatgtggccagcggctgccccctgttcttccca
ctggggaaattgaggtcgcctaagcacgcctactgcaaggatgacacaatctatatcaag
tgcgtggtggacacgtcctcctga
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