Triplophysa rosa: 130568462
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Entry
130568462 CDS
T09216
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
tros
Triplophysa rosa
Pathway
tros03320
PPAR signaling pathway
tros04120
Ubiquitin mediated proteolysis
tros04137
Mitophagy - animal
tros04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130568462 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130568462 (ubb)
04137 Mitophagy - animal
130568462 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130568462 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130568462 (ubb)
Ubiquitin system [BR:
tros04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
130568462 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
130568462
NCBI-ProteinID:
XP_057213322
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All DBs
Position
LG2:complement(16167431..16169961)
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtcaagaccttgacgggcaaaaccatcacccttgaggttgagccaagc
gataccattgagaacgtcaaagccaagatccaggacaaagagggcattccccctgaccag
cagaggttgatctttgccggcaaacagctggaagatggccgcaccctgtcagactacaac
atccagaaagagtccacccttcatcttgtgctgcgactcaggggaggtatgcagatcttc
gtcaagaccctgactggcaaaaccataaccctcgaggttgagccaagcgacaccattgag
aacgtcaaagccaagatccaggacaaagagggcattccccctgaccagcagaggttgatc
tttgccggcaaacagctggaagatggccgcaccctgtcagactacaacatccagaaagag
tccacccttcatcttgtgctgcgactcaggggaggtatgcagatcttcgtcaagaccctg
actggcaaaaccataaccctcgaggttgagccaagcgacaccattgagaacgtcaaagcc
aagatccaggacaaagagggcattccccctgaccagcagaggttgatctttgccggcaaa
cagctggaagatggccgcaccctgtcagactacaacatccagaaagagtccacccttcat
cttgtgctgcgactcaggggaggtatgcagatcttcgtcaagaccctgactggcaaaacc
ataaccctcgaggttgagccaagcgacaccattgagaacgtcaaagccaagatccaggac
aaagagggcattccccctgaccagcagaggttgatctttgccggcaaacagctggaagat
ggccgcaccctatcagactacaacatccagaaagagtccaccctccatcttgtgctgcga
ctcaggggaggtatgcagatcttcgtcaagaccctgactggcaaaaccataaccctcgag
gttgagccaagcgacaccattgagaacgtcaaagccaagatccaggacaaagagggcatt
ccccctgaccagcagaggttgatctttgccggcaaacagctggaagatggccgcacccta
tcagactacaacatccagaaagagtccaccctccatcttgtgctgcgactcaggggaggt
atgcagatcttcgtcaagaccctgactggcaaaaccatcaccctcgaggttgagccaagc
gacaccattgagaacgtcaaagccaagatccaggacaaagaaggcattccccctgaccag
cagaggttgatctttgccggcaaacagctggaagatggccgcaccctgtcagactacaac
atccagaaagaatccaccctccatcttgtgctgcgtctaagaggcggcatctaa
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