Triplophysa rosa: 130569799
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Entry
130569799 CDS
T09216
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
tros
Triplophysa rosa
Pathway
tros04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130569799 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130569799 (irf1b)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130569799 (irf1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
130569799
NCBI-ProteinID:
XP_057215660
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Position
LG19:1494215..1496929
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AA seq
298 aa
AA seq
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MPVSRMRMRPWLEAKVESNTIAGLVWVDKEKMMFSIPWKHAARHGWEVDKDACLFKQWAI
HTGKFRDGVTQPDPKTWKANFRCAMNSLPDIEEVKDKSVNKGCGAVRVYRMLPAVTKKKD
KRSKSRDGRRRAKPVSSKVKMQDMDDRITQENTIDSTEHRSTTSPTVDVPEMSGFEVEIG
PDSTNDNYLSKFQVSPVHETDFEQDANEAIIEITRQLERDSSQWLQNFHGKGFLANEGAT
TESLSPESQWSESSGEELEFRLYTELNSGLPEVSDMCSYTDMWNSSSSMPHQPLMCSL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtcccgaatgcgcatgcgaccctggctggaggctaaggttgaatccaacaca
atcgctggactcgtgtgggtcgacaaggagaaaatgatgttctcaatcccatggaaacat
gctgctcgccacggctgggaggtggacaaagatgcttgtttgttcaagcaatgggccatc
cacacaggtaaattcagggatggagtgacccagcctgaccccaaaacatggaaagccaat
ttccgctgtgccatgaactctctaccagacatcgaagaggtgaaggacaaaagcgtcaac
aaaggctgcggcgccgtgagggtctaccgcatgctgcctgccgtcaccaaaaagaaagac
aagagatcaaagagccgagacggcagaaggcgtgcgaagcctgtgtcgtcgaaggtgaaa
atgcaggacatggacgacagaattactcaggaaaacaccatcgacagcactgaacatcga
agcaccaccagccctaccgttgacgtcccagagatgtctgggtttgaagtggaaattggc
cccgacagcacgaacgataattacttaagcaagtttcaggtgtcaccagttcacgagaca
gacttcgagcaagatgcaaatgaagctatcattgagatcacacggcaattggaacgcgat
agttcgcagtggctacaaaatttccatggaaaggggttcctggccaatgaaggagccaca
acagagtctctcagtccagagagccagtggagcgaaagctcaggagaagagcttgaattt
cgcttatatacagaactgaactcgggcctgcctgaagtctctgacatgtgctcctacacg
gatatgtggaacagcagcagctccatgccacatcagcccctcatgtgttctctctga
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