Triplophysa rosa: 130571108
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Entry
130571108 CDS
T09216
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130571108 (cacna1ab)
04020 Calcium signaling pathway
130571108 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130571108 (cacna1ab)
Ion channels [BR:
tros04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130571108 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Chordopox_G3
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
130571108
NCBI-ProteinID:
XP_057217835
LinkDB
All DBs
Position
LG20:15441548..15549283
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AA seq
2492 aa
AA seq
DB search
MLSPMYADSSVIMEKAPPLWQRGRVQPQSHRIRCHPPTSGSSVCANPTYFHTVYDMSVET
CQAESFEYRKSNGGEAVVTDGMLYSLMPSDSLLPPVRRRGGLVDHRDVIKAHQSHKLQST
PQARRKQWEMARFGDEVPARYGGGGSGQGGPGRGGSRQGGPPGAQRMYKQSMAQRARTMA
LYNPIPVRQNCLTVNRSLFLFSEDNLVRKYAKKITEWPPFEWMILTTIIANCIVLALEQH
LPDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTG
ILSSVGSELDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGVLLFVAILMF
AIIGLEFYMGKFHRTCFDNITGEIYDEQPCGDSLPARACPEGTDCREYWQGPNYGITQFD
NVLFAVLTVFQCITMEGWTDMLYYSNDALGSAWNWMYFVPLIIIGSFFMLNLVLGVLSGE
FAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILAEDDNGTAGSRRRPTIKK
NKADLLNPEEGEDHMGDAVGSPFARASIKSGMGDGAHLSKKERRFRFLIRKIVKTQAFYW
TVLSLVGLNTLCVAVVHYDQSELLSDFLYYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSF
NCFDCAVIVGSIFEVFWAMVKPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSM
KSIISLLFLLFLFIVVFALLGMQLFGGQFNFDQGTPPTNFDTFPAAIMTVFQILTGEDWN
VVMYDGIESQGGVEKGMIFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEE
EATSQKIALQKAKEVADVSPLSAANLSIAAVTVKSERIDATDSLLHCKEQQKNSKVSKSV
WEQRTSEIRRQNLMTSREALYNELDAEDHWKMNYRNRTEMKTHLDRPLVVNPQENRNNNT
NKTRPGEPELNQQRGEEHLPHQSRHHHHHHHHHHTHSSRQSLHHSELRDAGYDRGGEDVE
VAVEHRRPRHHQHRRRDEDGGERGRRHREHHSRGGELGGEGEEGQEKKQRRHRHGNHGDG
NGRKDRERSRQNRARKECSLSTVQPGFSHGESQYSENLDNLRNSSKMAIHDPDPDPDPDL
YDPYCPEQTNNLLNLQGPDLHDSSLILTDSSKLDNTAIDMPPIYPSLNAKLQVNKNANTE
PGEKKEEEEDDGGDEDEPKRIPPFSSCFILSTTNPFRRCCHYILTLRYFEMCILSVIAMS
SIALAAEDPVSPESPRNNVLRYFDYVFTGVFTFEMLIKMVVLGLIFHEGSYFRDLWNFLD
FVVVSGALVAFAFTGSSKGKDISVIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNV
LNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFARDCRGEYLVYERNEVRSQKREWK
KYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDSTYEDQGPSPGYRMEMSIFYVVYFVV
FPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPQNKQSFQY
RMWQFVVSPPFEYSIMTLIALNTIVLMMKYKGASEAYDDVLKYLNIVFTILFFMECILKL
IAFGIKNYCRDAWNIFDFVSVIGSVTDILVTEIVENFINLSFLRLFRAARLIKLLRQGGT
IRILLWTFVQSFKALPYVCLLIAILFFIYAIIGMQLFGNLALDEEGERAIDEHNNFRTFI
MALMLLFRSATGEAWHEIMLACLGGMPCDENSGNEGNECGSNVAYAYFVSFIFLCSFLML
NLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPL
GLGKKCPHRVACKRLLRMDLPVADDNSVHFNSTLMALIRTALDIKIAKGGADKHQMDAEL
RKEMMAIWPNLSQKNLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKKLQVLREEQN
RTPLMFQRMEPSPNQEGGQGLNGLPELPQEPVNSLPPEGGMTESQSWVTSRAQEMFQKPV
PENWNPDRPYPDDHHDSRHNPQTVEMREIGPVGDGYSDTEPYHPMEGHGRTISMPRLSAD
NQSLRSAARRRHRPRGSNLSTITDTSPMHRSTSSLVHGRSGRGVRLDDYSLERVVSEEGH
RHAPRRRDRDRDRDRDRSHRTSERSLARYTDADTGLGTDLSTTTQSGDLPPKERERERGR
AKDRRHHHHHHHHHHSSMDKDRYAHDRDYHRHAHDRSDRHWSRSPSEGRGHRQGSSSVSG
SPVPSTSGTSTPRRGRRQLPQTPSTPRPHVTYSPAVRKPPYGSPGQGRLRSPSPRHFSPP
GHEPPYNRPPSRHASPHHGSPRSPRHASPRSPRHASPRSPPHGRWGPPPDSVEGDAPFYD
RDYEYERHNEPPAYEQSLSQGNPLSHPHPRSPRTAHHGPSAHPRRMPNGYRSSSPSPHRR
GPHPGPHRPSHGRGPRKGLHEPYSETDEDDWC
NT seq
7479 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcccatgtacgcagacagctcggtgatcatggaaaaagcgccgcccctgtgg
cagagagggagagtgcagcctcaaagccacagaatccgctgtcatccacccaccagcggg
agcagtgtttgcgccaaccccacttatttccacactgtttatgacatgagtgtcgaaact
tgtcaagctgagtcctttgagtacagaaaatctaatggaggagaagctgtggtgacggat
gggatgctttactctttgatgcccagtgattctctgttgccacctgtcaggaggagagga
ggacttgtggatcaccgtgatgtcatcaaagcacaccagtcacataagttacagagcact
ccacaagcccgtcgtaaacagtgggaaatggctcggttcggagacgaagtgccggccagg
tacggcggcgggggctccggtcaagggggacccggccgaggcggcagcaggcaaggcggc
ccgccaggggcccagaggatgtacaagcaatcgatggcccagagagcccggaccatggcc
ctctacaaccctatcccggtccgacagaactgcctgacggtcaaccgctctctgtttctc
ttcagtgaagacaacctagtgagaaaatacgccaaaaagatcaccgaatggcctccattt
gagtggatgattttgaccaccatcattgccaactgcattgtactggctcttgagcaacac
ttgccagacggagacaagactccgctgtcagaacgactggatgacacggagccatatttc
attgctattttctgttttgagtcgggcattaagattctggcgctaggattcgcctttcac
aagggctcctacctgagaaacggctggaacgtgatggactttgtagtggtgctcacaggt
atactctcctccgtggggtcagaattagatctgcggacattgcgagcagtcagagtgttg
cggccactaaaattagtgtcaggaattccaagcctgcaggtggtgctaaagtccattatg
aaggccatgattccactgctgcagatcggtgtgctcttatttgtggccatccttatgttt
gccatcattggcctggagttctacatgggcaaattccacagaacctgctttgacaatatc
acaggcgagatatatgatgaacagccctgtggtgattcgctgcccgctcgagcatgtcca
gaaggaacggattgtagggaatactggcaaggaccaaactacggcatcacacagtttgat
aacgtcctctttgccgtgctcaccgttttccagtgtatcaccatggagggttggactgat
atgctttattacagtaatgatgccttaggcagtgcctggaactggatgtactttgttccc
ctcatcatcatcggatccttcttcatgctcaatttagtgttgggtgtcctctctggtgag
tttgctaaagagagagagcgtgtggagaacaggagtgagttcctgaaactcagacggcag
caacagatcgagagagagctcaacgggtatctggagtggatctgcaaagcagaggaggtc
atacttgctgaggatgacaatggcactgcaggatcccgtcgcaggcccaccataaagaaa
aacaaagctgacctgttaaatccagaagaaggagaggaccacatgggagatgcagttggt
tctccatttgcgcgcgccagcataaagagcgggatgggcgacggagcacacttaagcaag
aaggagcgacgttttcgttttttaattcgaaagattgtgaagacccaggcgttctactgg
accgtcctcagcctggtgggactcaacacactgtgtgtggctgtggtgcactatgatcag
tccgagttactgtcggacttcctctattatgctgagttcatttttctaggcctctttatg
tcagagatgctgattaagatgtacggactggggacgcgcccttatttccactcctcattc
aactgtttcgactgtgccgtcatcgttggcagtatatttgaggtgttttgggccatggtg
aagccgggaacatccttcggaatcagcgtgttacgagctctgcgtctgcttaggatcttc
aaagtcaccaaatattgggcatctctgcgtaatctggtcgtttctcttctgaactccatg
aagtccatcattagtttactctttctcctctttctcttcattgtagtcttcgctcttctt
ggcatgcaactcttcggtggccagtttaactttgaccaaggcactcctcccacaaacttt
gatacgttccctgctgccataatgacagtgtttcagattctaacaggtgaggactggaac
gtggtgatgtatgatgggattgagtctcagggaggggtggaaaaaggcatgatcttctcc
gtattcttcatcgtcctcacactctttggcaactacacactgctgaatgtattcttggct
atcgctgtggacaacctggccaacgctcaggaactaactaaggatgaacaagaggaagag
gaggccacatctcagaagattgctctacagaaagcaaaagaagtggcagatgtcagcccg
ctgtctgccgcaaacctctccatcgctgcagttacagtaaaatctgaacgtatcgatgcc
acagacagtttactgcactgtaaagagcagcagaagaactcaaaagtttccaagtcggtg
tgggaacagcgcacgagcgagatccgcagacagaacctgatgaccagcagagaggcgctt
tataatgaacttgatgctgaagatcactggaagatgaattatcgcaaccgcactgagatg
aagacccacttggaccgcccactagtcgtcaatcctcaagagaaccgcaacaacaacacc
aacaagacccgaccaggtgaaccagagctaaaccagcagcggggtgaggaacacttgccg
caccaatccagacatcaccaccatcaccaccaccatcaccacacccactccagccgccag
tctctacaccactcagagctgagggatgcagggtacgatagaggaggcgaggacgtggag
gtcgcggtggagcacagacgaccccgacaccatcagcacagaagacgggatgaagatgga
ggagaacgaggaagaagacacagagaacaccacagcagaggtggagagctgggaggagag
ggggaggaggggcaagagaagaagcagaggaggcatcgccatggaaaccatggggatgga
aacggaaggaaggatagggaacgaagtcgacagaaccgggcgagaaaagagtgtagttta
tcaacagttcagccagggttttctcacggggagagccagtacagtgagaatctggataac
ctccgcaacagcagcaagatggccatccacgaccccgaccctgaccccgaccctgacctt
tatgacccctactgtccagagcagaccaataacctgctgaaccttcaaggaccagatctg
catgacagcagtctcattctgaccgactccagcaagctggacaacaccgccatagatatg
ccccccatttacccctcacttaatgccaaattacaggtgaataagaacgccaacacagaa
cctggcgagaaaaaagaagaggaggaagacgatggtggtgatgaagatgaacccaaacgc
attccaccttttagttcctgttttatactatccaccactaacccgttcaggagatgttgt
cactacatcctgacactgagatatttcgagatgtgcattttatcagtcatcgccatgagc
agcattgctctagcagcagaagacccagtgtcgcccgagtcacctcgaaacaatgtcctg
cggtactttgactatgtcttcaccggtgtgttcaccttcgagatgctcatcaagatggtg
gtcttaggcttgattttccacgagggctcgtattttcgtgatctgtggaactttctggac
tttgtagtggttagtggtgccctggtagcctttgccttcacggggagcagtaaagggaaa
gacattagtgtcatcaagtctctgagagtcctaagggtgctacgtcctctcaaaaccatc
aaacgtcttcccaaactcaaagctgtgtttgactgtgtagtaaactctctgaagaacgtc
ttgaacatcctcatcgtctacatgctgttcatgttcatctttgctgtggtggcagttcag
ctctttaaaggacgattcttctactgcacagatgagtccaaagagttcgcccgtgactgc
aggggcgagtatttggtgtacgagcgtaatgaggtcagatcgcagaagcgggagtggaag
aagtacgatttccactacgacaacgtgctttgggccctgcttactctctttaccgtgtcc
actggagaggggtggccacaggtgttaaaacactcggtggactccacttatgaggatcag
ggcccgagcccggggtaccggatggaaatgtccatcttttacgtggtgtacttcgttgtc
ttccccttcttcttcgtaaacatctttgtagctctcatcatcatcaccttccaagagcaa
ggagacaagatgatggaggactacagcctcgaaaaaaatgagagagcgtgtattgatttt
gctataaatgccaaacctctgacacggcacatgcctcaaaacaagcaaagctttcaatac
cgaatgtggcagtttgtggtgtctcctccttttgagtacagtatcatgactctcattgcg
ctcaacacaattgttctgatgatgaagtacaaaggcgcctctgaagcatatgatgacgtt
cttaagtacctgaacattgtgttcaccatactcttctttatggagtgtattctaaaactc
attgcctttggcatcaaaaattactgccgagacgcttggaatatttttgattttgtctcc
gttatcggcagcgtcacagatattttagtgacagagatagtggaaaacttcataaacctg
agttttctgagactcttccgagcagctcgtctcattaagctcttgaggcagggtgggacc
attcgcattctgctttggaccttcgttcaatcctttaaggctctcccatatgtgtgcctg
ctcattgccattttgttcttcatctatgccatcattggcatgcagttgtttggaaacttg
gcactggatgaagagggagagcgcgcgatcgatgaacacaacaacttcagaacctttatc
atggccctcatgctactcttcaggagcgccacgggcgaggcatggcatgagatcatgctg
gcttgtcttggagggatgccgtgcgatgaaaattctgggaatgagggaaacgagtgtggc
agcaacgtcgcctatgcttactttgtctctttcatcttcctgtgttctttcctgatgctg
aatctctttgtcgctgtcatcatggataactttgagtacttgaccagggactcctccatc
ctgggtccacatcatttggatgagtatgtcaggatatgggcagaatacgaccctgcagct
tgcgggcgcattcattataaggatatgtacagtttattgcgggttatcgaccccccgctg
ggcttaggcaagaaatgtcctcatagggtggcctgcaagagactgctgcgtatggaccta
cctgttgctgatgacaacagtgtacattttaactctacactaatggccttgatccgcaca
gccctggacatcaaaatcgccaagggaggcgcagacaaacaccagatggatgcggagctc
cgtaaggaaatgatggcgatttggccaaatctttcccagaagaacctggatctgctggta
acgccacacaagtcagcaacagacctgacggtgggcaagatctacgccgccatgatgatt
atggagtattaccggcagagcaaagccaaaaagctgcaggtgcttcgagaggagcagaac
cgaacgccattaatgtttcagcgcatggagccgtctccgaaccaggaaggggggcagggg
ttgaacggcctccccgagttaccgcaggaacctgtcaacagcctacctccagagggcgga
atgactgagagccagtcatgggtgacatcacgtgcccaggaaatgttccagaagcctgtt
ccggaaaactggaaccccgacagaccgtatcctgacgatcaccacgacagccgccacaat
ccacagacggtagaaatgagagagattgggcctgttggggacggttactcggacactgag
ccctatcacccaatggaagggcatggccggaccatctccatgccacgcctctcagcagac
aaccaaagtttgcgttctgctgcgcgacggagacacaggccgcgaggaagtaacctcagt
accatcactgatacaagtccaatgcaccgttccacatcctcactggtccacggacgttca
ggtcgaggcgtaagattggacgattactctttggagagagtggtgtcagaggagggccac
cggcatgctccaagaagaagagatcgcgatcgagaccgggacagagatcgcagtcatcgc
acttcggagagatccctcgctcgctacacagacgcagatacaggtctgggcacggatctc
agcaccactacgcaatcaggtgaccttccacctaaagaaagggaacgagagcgggggcga
gcgaaagaccgccgccaccaccaccaccatcatcatcaccaccacagctcaatggataaa
gaccgttacgctcacgatcgcgactaccatcgtcatgctcacgacagatctgatcgccac
tggtctcgctcgccgagtgaggggagagggcacagacagggcagtagttccgtgagcgga
agccccgttccttcgacgtcggggaccagcaccccccggcgtggccgtcgccagctgccc
cagaccccgtctacaccgcgccctcacgtcacctactcccccgctgtccgcaagcccccg
tacggctccccgggacagggtcgactccgctccccatctccaagacacttctctccgcca
ggtcacgaaccgccctacaaccgaccgccctcccgccacgcctcgccccatcacgggtca
cccaggtctccccgacacgcgtcccctcgctctcccaggcacgcatcgcccagatccccg
cctcacggccgctggggcccaccgccggacagcgtggagggcgatgcaccgttctacgac
agggactatgaatacgaacgccacaacgagccgcctgcctatgagcagagtttatcgcag
ggcaaccctctttcgcacccacaccctcgctcgccaaggactgctcatcacgggccttcc
gctcacccgcgccgtatgcctaacggctaccgctcctcctcgccctccccgcaccgccgc
ggcccccacccaggtccacaccggccgtcacatggccgtgggccccggaaggggttgcac
gaaccctatagcgagacggacgaggatgattggtgttag
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integrated database retrieval system
