Triplophysa rosa: 130571228
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Entry
130571228 CDS
T09216
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
tros04260
Cardiac muscle contraction
tros04261
Adrenergic signaling in cardiomyocytes
tros04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
130571228 (slc8a1a)
04020 Calcium signaling pathway
130571228 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
130571228 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
130571228 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130571228 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130571228 (slc8a1a)
Transporters [BR:
tros02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
130571228 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Others
130571228 (slc8a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
CFSR
Flu_M2
HTH_70
Motif
Other DBs
NCBI-GeneID:
130571228
NCBI-ProteinID:
XP_057218047
LinkDB
All DBs
Position
LG20:complement(15346382..15375863)
Genome browser
AA seq
974 aa
AA seq
DB search
MGQSRTSSYFSLALKLSIFLLVFSHELVPASAGGSKSSLDVDTSSNETSDEKCGGSNECK
EGVVLPIWMPLNPSFGDKLARATVYFVGLFYMFLGVSIIADRFMASIEVITSQEKEITIK
KPNGETTTTTVRIWNETVSNLTLMALGSSAPEIMLSVVEVCGHNFDAGELGPNTIVGSAA
FNMFVIIGLCVSVIPEGEHRKVKHLRVFFVTATWSIFAYTWLYLILAVISPGIVEVWEGL
LTLFFFPICVLFAWVADRRLLFYKYVYKRYRVGKQRGIIIETEGEPELQSKADIEMVGGI
RNSHGEELFDGTVDIEDKGMDEEETRKEMARILKELKQKHPEKEMEQLIELANYQVLSQQ
QKSRAFYRCQATRLMTGAGNILKRHAADQARKAIGIHELRSEVSDNDISSKIFFDPGTYQ
CLENCGTVALNVVRRGGDLTNTVSVEYRTEDGTANAGSDYQFTEGVIVFKPGETEKEITV
DIIDDDIFEEDEHFLVHLSNVKVVSEGTGNGNPGANHVETLAGLGLPCTATVTIFDDDHA
GIFTFEEPTIHISESIGTIEVKVVRTSGARGVVVVPFKTIEGTAKGGGEDFEDTHGVLEF
QNDEISKTIPINIIDDEEYEKNKNFFLEVGEPQLVEMSERKAVLLRECGGFVKTDKQLFG
RNVYRKVQGRDKPIPSTIISIAEDGEDETLTVKEKDERRIAEMGRPTLGDNVKLEIIIEE
SYEFKSTVDKLIKKTNLALLVGTNSWRDQFVEAITVSSGNDDVDECGEEKMPSCFDYVMH
FLTVFWKILFAFVPPTDYWNGWACFIVSIIMIGVLTAFIGDLASHFGCTIGLKDSVTAVV
FVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIFHQSQGQY
FHVEPGTLAFSVTLFTIFAFVCIAVLMYRRRPEIGGELGGPQTPKILTTTLFFSLWLMYI
VLSSMEAYCIIQGF
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggccaatccaggacttcatcctatttttctctcgctctaaaactcagcatcttcctc
ttagttttctcccatgagcttgtgccagcctctgcaggcggctccaaatcaagcttggat
gtggatacttcttctaatgaaacttctgacgagaagtgcggcggtagtaatgagtgcaaa
gagggggtggttctgccaatttggatgccgttgaacccgtcctttggagataaattggcg
agagccactgtgtactttgtcggtttattctacatgttcctgggggtgtccatcatcgca
gatcgctttatggcttccatcgaagtcatcacatcccaggaaaaagagatcaccatcaag
aagcccaacggtgaaaccacaaccacgaccgttcgtatatggaatgaaaccgtctctaat
cttactctcatggctctggggtcatccgctccagagattatgctctccgtggttgaagtg
tgtggccacaactttgatgcaggggagctcggcccaaacaccatcgtaggaagtgcagct
tttaacatgtttgtcatcataggtctttgtgtctctgtgataccagaaggagagcatcgt
aaagtcaagcacctgagagtgttctttgtcacagcaacatggagtatctttgcatacact
tggctttatctgatattggcagtgatctccccaggtatcgtggaagtttgggaaggactt
cttactctcttcttctttccaatttgtgtcttgtttgcttgggttgcagaccggagactg
ctgttctacaagtatgtgtacaaacgttacagagtaggaaaacagaggggaataatcatc
gaaacagaaggcgagcctgagctccaatccaaggcagatatcgaaatggttgggggaatt
cgtaactctcacggggaggaattgtttgacggcacggtggatattgaagataaaggcatg
gatgaggaggagaccaggaaagaaatggccaggattttaaaagagctgaaacagaaacat
ccggaaaaagagatggagcagctcatcgagctcgccaactatcaagttctcagccagcag
cagaaaagtcgggctttctatcgctgccaggccaccaggctaatgaccggtgccggcaat
attctgaagaggcacgccgcagaccaggccagaaaagcaatcggcatccacgaacttcgc
tcggaagtctccgataacgatatctcctccaaaatattttttgacccaggtacatatcag
tgtcttgagaactgtgggaccgtggcgttaaacgtggtacggcgcggcggcgacttgaca
aacaccgtgtcggtcgaatatagaaccgaggacggcactgccaacgcaggctccgattat
cagttcacagagggcgtaatagtatttaaaccaggtgagaccgaaaaggagatcacggtg
gacatcatcgacgatgacatttttgaagaagatgaacacttcctggttcatctcagcaat
gttaaggtggtttctgaaggaacaggcaatgggaacccaggcgccaatcacgtagagact
ttagctggtcttggccttccttgcacagcgactgtgactatttttgatgatgaccacgct
ggaatcttcacatttgaggaacccacgattcatatcagtgaaagcattggtacaatagag
gtgaaggtggtgcgtacctccggagctcgtggagtagtcgtggtcccgtttaaaaccatt
gaaggcacagcgaaaggtggaggagaggactttgaagatacccacggagtcctggagttt
cagaatgatgagatttccaaaactattccgatcaatattatcgatgacgaggagtatgaa
aagaataagaacttcttcctggaggttggagagccacagttggtggaaatgagtgagaga
aaagctgtcttgctgcgtgagtgtggtggtttcgtgaagacagataaacagctttttggc
aggaatgtgtaccggaaagtgcagggtagagacaaacccatcccctccaccattatcagc
atcgcagaggacggggaggacgagaccctgactgtaaaagaaaaggatgagagacgtatc
gctgagatgggtcgcccaacgctgggcgacaatgtgaaacttgaaataatcattgaggag
tcctatgagtttaagagtacagttgacaaactcataaagaaaaccaacttggcccttctg
gttggaaccaacagttggagagaccagtttgtagaagccatcactgtcagctcaggtaat
gatgatgtcgatgagtgtggtgaagaaaagatgccgtcttgctttgactatgtcatgcac
ttcctgactgtgttctggaagattctgtttgcttttgtgcccccaactgattactggaat
ggttgggcgtgttttattgtgtccatcatcatgattggcgtcctcactgctttcattgga
gatctggcgtcacatttcggctgcacaattggcctgaaagactctgtcacagcagtcgtg
ttcgtggccctgggaacctccgtgccagacacttttgccagtaaggtggcagccacccag
gatcaatacgcagatgcttccatcggcaatgtgacgggcagcaacgccgtgaacgtgttc
ttgggcattggagtggcttggtctatcgctgctatctttcaccaatcgcagggccagtat
ttccatgtggaacccggcacgctagctttctccgtcacccttttcaccatctttgccttc
gtctgtatcgccgtcctcatgtaccgccgcaggccggagatcggtggggaactgggcgga
ccgcagactccgaaaatcctcaccaccactttgttttttagtctctggctgatgtacatc
gttttgtcctccatggaggcctattgcatcatccagggtttctaa
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