Trichoderma reesei RUT C-30: M419DRAFT_11261
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Entry
M419DRAFT_11261 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_11261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_11261
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
M419DRAFT_11261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_C
Nup188_N-subdom_III
Nup188_SH3-like
Nup188_N
Motif
Other DBs
NCBI-ProteinID:
ETR99158
JGI:
TrireRUTC30_1_11261
UniProt:
A0A024S1D4
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MAPVSDSNYFPSVGQCLSGDKVLLSWKLVATALSDATGERQKSSAIVRFFDDDYVRGLLS
EPATAFAPPDEATNKSFETRTAPINVTSASTDRYDIDQFKEDAKWLSKNAKVNLVAALRV
VLVEYQSRSSRHLLGPLSSHDAANLQEAAGLQNGQGLAFLSDLGAAAALDADEISAEFDK
ADTRRRRLFDTFLTERRFFIMVADYATSIKLYQRLPIFAPGDDSVADLYKLRMSAQPRDE
MEAMLPAYLDVVSSCMSGIEAGMKAFTDEEVLLNDGVELEWIRSLLTEVVHSLSVVLQLV
DCYGSDFPPSSAINQWFSLMEIYGFFDSIQPIDPTTAELVMPMKVLASAISIGLLKPARA
LAYLSDRDEDPAQADDVYDSYLLSPDVLEQVHKSILDAAGSDSETACPVIFTWSFLLHRL
NVSYQTRTDKRDNLIQQSAREKFETRSVMRTPTGRRNSAGSIYSIESSKFDGFLENASTP
RDMQVVEQLAAVATAQGRVFDIMSKMAETLGPSVDGSLSPLISSRLRAVFLELLKVSYPF
VGYQSDSVSCLHALLSPGRGYWDLSASDNMPVDQDILSSVLRDDLAMDFFFQQALDRYPY
EFLPFITLCRILCTASQESPDERTDMILDLLLKTPTITFTLPNLFQGYELVQEDENTNSF
CLVEEVPLISLSSSWSRRYIEDDAYRIPAGTYGRFITDTGRVVLMDYPHSTLALLGRRLE
ISLSQEGYRCELGMLQPEETAEVISLLASLLRMEQLKVARQGGGSSSSALVRFDDDLLSE
ASAHISGGKDIVTVVCETMDYYMQDELAMTEDSAVSVLTACVKFLHAVLQVQPSRVWSYL
ARTELLNSESRAGKLTKIIGSLELVSERFEFLASSLSLFSALIDTVMSSAVQRRAGSKPA
SRQQPETNPWLGTADKVLSQVSLSIAQTSVDVFENTSTWMFDSESSRISLLQRVVPILDK
IVLYTYSMGDCPRSDNLTSCLRPAASHIIDCFLSPSGGSLRFQPLLLSFISALTKSDSTL
YPKRTEAVRSQITSVLDFSTTLLRVAKYLERPSTLVETYLFKTSTLSARLCAVSDHFRGP
ALSLLEALVVNAGQSTSEPPSLLGYLGPHISKSFLHILAAIGQPFALQSEVKTTWRFFTS
ILKNRQQWMSNCLLTGQTPREAMKEDTKKNEMSADSVFATALSKLKILKDIETREALVIL
DFVTSAQNYWPWTVFTLQKDTSYMDGLRAYVRDLKPSHQTVKTDAVLAATQARIAAYIAE
IFAMQLYHSRHLGKADTLAKGLSNDLDYYLRDGVEVSSYNKSLHNNFARNFSNKFFGCSL
DNFKRTVVGPRELGENYYYDLDRADEVLRFDPGWQGKKGAGFLNEMKLANANLSLVDAQI
ALFHAWELLLLELGTCFPETDATKKHMMQVAQQCLNANQVVPGPESIFLKIVDARADLAL
ILIQRLVNSTLAVKDVNQVLDTLIGTINSVEEPFEAESIAYYRTLLKALFVTLRAYQTAS
SKAAASSQADLEGSLVTVTQTILNVLDTVVARGFRSLVSLIHDKAADVFPEDLALLTAIM
QACLSVPNIEQSQTQILNIMASHDATHAATSLYSWADKLGDHGDPVYGELSILFLLELST
LPLLAEQLACDGVLGAILSANLTKYLLRTNVSPYADAPIAQRCYGIWVKGMLPLMLNLLT
SLGATVAPEITYVLNQFPHLLQASVERFEAPGASRTKEKSAQYLTLLGTSEIHSLALLTR
VLAALRANNSRDIPPVEWDEAGLLENVDYWLSSRRLLKERLLPLGPREMEWRGRKLTGDC
DNVLEEKVVVQLETVRDVLSEEFEG
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtgtccgatagcaactatttcccctccgtgggacagtgcctctccggcgac
aaggtgcttctatcgtggaagctcgtcgctacggccctctcagatgcaactggagaacga
caaaagagctctgcgattgttcggttcttcgacgacgactatgtccgcggactgctgagc
gaaccggcgaccgcgtttgcgccgccggacgaggctaccaacaagagcttcgagaccagg
acggccccgatcaacgtcacctccgcgtcgacagaccgatacgatatagaccagttcaaa
gaggatgcaaagtggctcagcaaaaatgcaaaggtcaacctggtcgctgccctgcgggtc
gtcctcgtcgagtaccagtcccgctcttcaaggcatcttctcggccctctatcgtcccac
gatgccgccaacctgcaggaagccgcgggcctgcagaatggccaggggctggcgttcttg
tcagacttgggagccgcagcggctttggacgccgacgagatatccgccgagttcgacaag
gccgacaccagaagacgccgtttattcgataccttcttgaccgagcgccgcttcttcatc
atggtcgcggattatgccacgtccatcaagctgtatcagcggcttcccatcttcgctcct
ggagacgatagcgtcgccgatctgtacaagttgaggatgtctgcgcagccacgcgatgag
atggaggcaatgctgccggcctatctggacgtcgtctctagctgcatgagcggaatcgag
gccggcatgaaggcatttacggatgaagaagtgctgctcaacgacggagtggagttggaa
tggatacgcagtcttctgactgaggttgttcacagcttgtctgtggtccttcagttggta
gactgttatggcagcgatttccctccgtcctcagccatcaaccagtggttctcactgatg
gagatttatggctttttcgattccatacagcctatcgatccaaccactgccgagctggtc
atgccgatgaaggtcctcgcttcggccatctccattggcctgctcaagcctgcacgagca
ctcgcatacctgtctgatcgagacgaggaccccgcgcaggctgacgatgtatatgattcg
tatctgctctcgcctgatgtcttggaacaggttcacaaaagcatcttggacgcggccggg
tcagactcggagactgcctgccctgtcatcttcacatggtcctttctcctccaccgactc
aacgtgtcctaccagaccaggaccgataagcgcgacaacctgatacagcaaagtgcccgg
gagaagtttgagacgcggagcgtgatgcgcacgcctactggccggcggaactcggctgga
agcatctattccattgagtcttccaagttcgatggctttctcgagaacgcatcgactcca
agggatatgcaggttgtcgagcaacttgcggcggtcgccacggctcagggcagggttttt
gacataatgtcgaagatggccgagaccctaggcccgtctgtggacggcagcctgtcgccc
ctgattagctcgcgccttcgcgccgtcttcctcgagctcctcaaggtatcatatccgttc
gtcgggtaccagtcggactccgtgagctgtctgcatgcccttttgtctcctggtcgaggc
tattgggacctatctgcgtcagataatatgcccgtagaccaggacattctcagctccgtg
ctacgggacgacctggccatggatttctttttccagcaagcccttgatcgatacccctac
gagttccttcccttcatcacgctctgccgtatactctgtactgcatcgcaagagagtccg
gatgagaggacggatatgatcctcgacctgctcctcaagacaccgaccattacctttaca
ctgccgaacctattccaaggatatgagctggttcaagaggacgaaaacacaaactctttc
tgcctcgtggaggaagttcctctaatttctctctcatcctcatggagtcggcggtatatt
gaggatgacgcttacagaatacctgcgggcacctacgggcgattcatcacagacactggg
cgcgttgtcctgatggactatcctcactcaaccttggctctccttggtcggcgactcgag
attagcctctcacaagaagggtatcgttgcgaactgggaatgttgcaaccagaagagacg
gccgaagtgatttcgttattggcgtcgctactgcgaatggagcagctcaaggtagcaagg
caaggcggcggcagcagcagcagtgcattggtccgttttgacgacgatctgctgtccgag
gccagcgcccacatcagcggcggcaaagatatcgtcaccgttgtgtgcgaaaccatggac
tactacatgcaggacgagctagccatgaccgaagacagtgctgtcagcgtgctcacggca
tgcgtcaagttcctgcacgctgttctccaggttcaacccagccgggtctggtcgtacctc
gccaggacagagcttctcaactcggagtcacgagccggtaaactcaccaagatcatcggc
agcctcgagctggtctcggagcgatttgagttcctcgcttcttcactgtcgctcttctcc
gcgctcatcgacactgtcatgtcctctgccgtgcagcgtcgggcggggagcaagcctgcg
agtcgtcagcaacccgagacgaatccctggcttggcaccgctgacaaggtgctctcccag
gttagcctttcaattgcacagacgtctgtggatgtgtttgagaacacgtccacctggatg
tttgactcggaaagcagtagaatatcgctgctgcagagagtcgtccccatcctcgacaag
attgtgctttacacctacagcatgggcgactgtcccaggtcggacaacctcacgtcctgc
cttcgccctgctgcttcccacatcatcgactgcttcctgtcgccatcgggcggaagcctg
cggtttcaacctcttctcctctccttcatctccgcccttacaaaatcagactcaaccctg
tatcccaaacggacggaagctgttcgaagccagataacatcagtgcttgacttttccaca
actctccttcgagttgcaaaatacctagagcggccctcgaccttggtcgagacgtacctc
ttcaaaacctccacgttatcggcgcggctctgcgccgtgtcggaccatttccggggacca
gcattgtcgctgctggaggcactggtcgtcaatgccggccagtccaccagcgaacccccc
tccctcttgggatacctcggccctcacatttcgaaatccttcctccacattctcgccgcc
attggccagccctttgccctgcagagcgaagtcaagaccacttggagattcttcacgtcc
atcttgaagaaccgacagcaatggatgtccaattgccttctcacaggccaaacgccgcgg
gaggccatgaaggaggataccaagaagaacgaaatgtccgcggattctgtctttgcaacg
gctctgtctaagctcaagatcttgaaggacatagagacgagagaggcccttgtcattctg
gacttcgtgacatcggcacaaaactactggccttggacggtgttcaccctccagaaagac
acgtcttacatggatggattgcgggcctatgtccgtgacctgaagccctctcaccaaacg
gtcaaaacggacgcggtgcttgctgctacccaggcaaggattgctgcgtacatcgccgag
atttttgccatgcagctctatcactcgcggcacctcggcaaggcggatacgcttgcgaag
ggactgtctaacgatcttgactactacctgcgtgatggtgttgaggtgtcaagctacaac
aagtctctccacaacaactttgcaaggaacttttcgaataagttctttggatgctccctg
gacaacttcaagcggaccgtggtgggcccgagggagctgggcgaaaactattactatgac
ctggaccgcgccgatgaggtcttacgcttcgatcctggatggcagggaaagaagggggct
ggtttcctcaacgagatgaaactcgcaaatgccaacctgtccctggtcgacgctcaaatc
gctctcttccacgcatgggagctcttgctgcttgaactgggcacgtgcttcccagaaacc
gatgcaactaaaaagcacatgatgcaagttgcccagcaatgcttgaacgcaaaccaggtg
gtcccgggaccggagagcatcttcctcaagatcgtcgacgcaagagccgacctggccctt
attttgattcagcgcctggtcaactccacccttgctgtcaaggatgtcaaccaggtactg
gatactttgattggcaccatcaacagtgttgaagagccctttgaagccgagtccattgct
tactaccgcacgcttctgaaggccctgtttgttaccctgcgggcttaccagaccgcatcc
agcaaggcagcagcgagctcgcaggcggacctcgagggttctctcgtaacggtcactcaa
accattctgaacgtgctcgatacggtggttgccagaggcttccgatcgttggtcagcttg
attcacgacaaggcggcagatgtcttccccgaggatcttgctctcctcacagccattatg
caagcctgcctcagcgttcccaacattgaacagtcccagacgcagattctcaacatcatg
gcctcgcatgatgctacacatgcagcgacatccttgtactcgtgggctgataagctcggg
gatcatggtgatcctgtgtacggcgaacttagtatcctattcttgctggagctctcaacc
ctacccttgttggcggagcagcttgcgtgtgacggggtgctcggcgcgattctgtctgcc
aacctcaccaaatacttgctcaggaccaatgtctcgccgtatgccgatgcgcccattgca
cagcggtgctacgggatctgggtcaagggcatgctccccctcatgctcaacctgctcact
tctctcggggcgacggttgctcctgagattacctatgtcctcaaccagttcccgcacttg
ctgcaagcgagcgtagagcggttcgaagcaccaggagccagccgaaccaaggaaaagtct
gcgcaatacctgacgctccttggcacctcggagattcactctttggcgcttctcacgcgc
gtgcttgcggctcttcgagcgaacaacagcagagatatccccccggtcgagtgggatgag
gcgggtctcctggagaacgtagactactggctctccagcaggcgtctgctgaaggagcga
cttcttcctctggggccgcgggagatggaatggagggggagaaaactgacaggggactgc
gataacgtgctggaggagaaggttgtggtgcagctggagacggttcgcgacgtgctcagc
gaggaattcgagggctga
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integrated database retrieval system
