Takifugu rubripes (torafugu): 101065747
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Entry
101065747 CDS
T02386
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X3
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101065747 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101065747 (cnot10)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101065747 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
ARM_TT21_N
TPR_14
ARM_TT21
Paf67
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
101065747
NCBI-ProteinID:
XP_003965772
Ensembl:
ENSTRUG00000006110
UniProt:
H2SR13
LinkDB
All DBs
Position
7:complement(3301915..3310615)
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AA seq
740 aa
AA seq
DB search
MAENLEQNESKHDGSPSPGMTDQEKEVAASAYEAFLAGRYDESLKHLEGLQELNKEDYKI
SMNEAIVKFYKSGQTTTGALKQSLMVLKNQVHTTAEDADGLDDVENSLLCYNQAIIHYYL
RQFSEAISIGERLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKALHLLAVLDKLSAHGN
NKNSKGENNSSNKDGVSHKTEVTALTEAAKSKIHQYKVRAYIQMKSSKACKREIKSVMNT
AGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGPIKTGECVRCMFWNNLGCIHFA
MGKHNLGIFYFKQALQENDHTCAQLGDGSNGQSKKFTGIPMCALLATKRYELLYNCGIQL
LHIGRPLAAFECLMEAVQVYHSNSRLWLRLAECCISANKGGSEQESKGLPCKKGIVQSIV
GQGYHRKVILASQSNQNSMYSEGQSAAIPVASMEFAAICLRNALLLLPEHQPQDIKTENN
SRATSQSGSTESGSENSDVCSGKGQEADKFLSAAPSSPLRKQEIENLRCSILACSAYVAL
ALGDNLMALNHAEKLLHQAKVSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVSDVSM
GVLTSEQDQGSDKGDEPVESSKQTPMFYPSSVTSARAMMLFNLGSAYCLRSEYEKARKCL
NQAATMVNTREIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPMTIQRISPDSRKKPLQ
PLHSVQPVQLPSPFTQVQRK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaacctagaacaaaatgagtcgaagcatgatggttcaccttcacctggaatg
acggaccaggagaaggaggtggcagccagcgcctatgaagcctttttggctggcaggtat
gatgagtctctgaagcatctcgagggcctccaggagctcaacaaagaagactacaagatt
tccatgaatgaagctattgtgaagttttacaaaagtggccagacaacaacaggagcccta
aagcagtctttgatggtgctgaagaaccaggttcacaccacagcagaagatgcagatggt
ctggatgacgttgagaatagtttgctttgctataatcaggcaatcatccactactacctg
cggcagttttcagaggccataagcataggagagagactctaccagtttctggaaccattc
gaagagaagtttgctcaggccgtgtgcttccttctggtggatctgtacctgctcacgttc
cagcctgagaaggccctccacctgctggctgtgctcgacaaactgtctgcacatggaaac
aacaaaaacagcaaaggagagaacaacagttcaaacaaagatggagtgagccacaaaaca
gaggtcacagctttgactgaggcagccaaatcaaagatccaccagtataaagtcagagct
tacattcagatgaaatcatctaaggcctgtaaaagggaaatcaagtctgtcatgaacaca
gctgggaattcggcaccttcgctctttctgaagagtaattttgagtacctgagggggaac
tatcggaaagcagtcaaactgctaaacagctccaacattgcagagcatcctggacccatc
aagacgggtgaatgtgttcgatgtatgttctggaataacctgggctgcattcactttgca
atggggaagcataacttgggtatattctacttcaagcaagcactacaggagaatgatcac
acctgtgctcagctgggggacggcagcaatggtcaatctaaaaagttcacgggtatcccc
atgtgcgcactactggctaccaagcgctatgagctgctgtataactgtggtattcagctg
ctgcacattgggaggcctctggcagcattcgagtgtctgatggaggcggtgcaggtttat
cactccaactcacgactgtggctgcggctggcagagtgctgcatctctgctaacaaaggg
gggtccgagcaggagagcaaaggtctaccctgtaagaaaggtattgttcagtctattgtc
ggccagggataccatcgcaaggtcattctggcatcccagtctaaccagaatagtatgtac
agtgagggccagtctgcagccattccagtagccagtatggagtttgcagctatctgtctg
agaaacgcattgctgctgttacctgaacatcagccgcaggacatcaagacggagaacaac
tccagggcgaccagccagtcggggagcacggagagtggtagtgagaacagtgacgtctgc
agtggcaaaggtcaggaggctgacaagttcttgtctgcagctccatcatctccactcagg
aagcaggaaatagaaaacctcaggtgctcgatcctggcctgtagcgcttatgtggcatta
gcactgggggacaacctgatggctctcaaccatgctgagaaattgctccatcaagccaaa
gtttcaggatctctgaagttcctgggtcacctctacgctgctgaagcgcttatttcattg
gacagaatctctgatgctatcgctcatctcaatccagagaatgtgagcgatgtgtctatg
ggggtgctgaccagtgaacaggaccaaggatctgacaaaggagacgagcccgttgagtcg
agcaagcagacgcctatgttttaccccagtagcgtgacctctgctcgggccatgatgctc
ttcaacttgggcagcgcctactgcttgaggagcgagtacgagaaggctcgcaaatgcctc
aatcaggctgcaaccatggtgaacactagagagattccaccagaagccatcctgttagga
gtgtacttggagctgcagaatggaaacacccagctggctctccagatcatcaaacgaaat
cagctgctgcccatgacgatccagagaatctccccagactcacgcaagaaacctctccag
cccctccactctgtccagcccgtccagctgccctcacccttcactcaagttcaacggaaa
tga
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