Takifugu rubripes (torafugu): 101080002
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Entry
101080002 CDS
T02386
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101080002 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tru03019
]
101080002 (ttc37)
Messenger RNA biogenesis [BR:
tru03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
101080002 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_19
TPR_17
TPR_8
TPR_14
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_9
TPR_6
ANAPC3
HAT_Syf1_CNRKL1_N
PknG_TPR
ARM_TT21_C
TPR_15
Motif
Other DBs
NCBI-GeneID:
101080002
NCBI-ProteinID:
XP_011614358
Ensembl:
ENSTRUG00000002140
LinkDB
All DBs
Position
21:complement(18904703..18915484)
Genome browser
AA seq
1582 aa
AA seq
DB search
MTMSTLSGLPGFQMSSKEVKTELKSAREAIKKKEFKEALKHCKAVLKLEKNNYNAWVFIG
LAASELEQPDQAQTAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKDELPNVYQKLVDLY
ASSDKNKCYELIRKLLDIYHSDKEYLKLAKLWLQLLHLKEEEAVERKELLQLWQEMAQLL
LDCLNEEEQHGDIQQHLITAFEKALSLMDAVPGEEHKKVSLDYIRCLSKLPTEEGRLKEA
CESMLALYPNQSYPLEVLCSHYLNTGAQDEVAVSCFSRLLNLAPNSGLGHLGLGTKALHE
GRFKDAIKELQQGLKKMSLNTGWYSLAEAQFKTHKYSDSAVSCSQGLALCASEDEQQREK
LLRLKLEALVGSGGEEAASEAMETFSQLSGAKEDPVLLMLKGRAHLNMGHVDQALQASSE
LLSSRPNLAQAFVLRGLVQVAQGEQQLAEESFLKAISQSPDCGEYYFLLGKLYWDMGEAT
RNDRSKAYTHLIKAAKLDPNAGRVFHYLGRYYQEVVCDHGRARGCYKKAFDLDNDDVESG
AAAVDLSMKDDDMDSALEMLQSVIEKATPGSGKWAWLRRGLYYLKIGQHQKAIADLQAAL
RADPEDWVCWECLGEAYLNRRSFTAALKAFGKAHQLHPGSIYSVYQAAAIKQTLGKFKEA
VAEYLQITAQQDYVPALKGLGECQLSLAKSLMEDCRDGGAVDLIQQAIVNLFRAVELRPD
LSCLWKLLGDACTAVSTVSPNRAQLAIPAALAGLVPDAQNQLLNQAQALKVGERCYVRAL
RLMPEVPSLWHDLGLNYYHQSRLPCVSGGEENAPCLLLEKAQECLKKAVMLDSASHNHWN
ALGVISMSKGLENFALAQHCFIKSIEVEQNNVVAWTNIGTLYLKKENIELAHKAFKVAQS
LEPLYVNCWIGQALIAEKVGNYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDS
ELYRYNIVQMNAVSAAQVALTKYTERIQCDPAAFIMLGYLNEHLHLKRQALHGYQRAVEL
LQSSSREELVFALGNYGRALSTLGQWDKAACVYKSTQLQELSDVVGLALAYCRAGRLTES
RDAYDSALALAATEKEKAYILTAQALLQHRQGNLDLAKTLLFKCSMLKEPISESLLCLCA
LGLVHSDATLASAALTELLKQGAPSGSVVEQRCLLTCALLALQRNYSAVQREASRAVHSN
PGNASLWALLSRVIPQYYPRKANGGATAGHVACLSSMTQGKRALLYSGVNQLANGRHSGE
DSHNNALKMMQRAVLLCPDDPATWAGLMAACHTENTCCYLSGSAPRRQGMEQSLMAIVSE
KVCDVEEIERPLAQSLEGWVLQQAVAGLMLAGQLEQAEALCSQVLSVSPEHPGVLLLLRQ
VQCQRLLGAADHAVLPDGVLEQLNNTVMVNPTNLGAWHWLAEVYRGQGLLLQAVMAYRQS
LQLASQLGIHNSQFASLLRLALLALRPCMAGVQGNQWADLILEATAEVLKLSPAPVALLF
QALLQFATKMPARETRRSLERLTCVSSQDFPVTVVQVARWYLLRHLHAKGDEELIKVHLQ
HAKESGDERLLTFHSLLNKSQL
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtctactttgtctggattacctggattccagatgtcgagtaaagaagtgaaa
actgaattgaaaagcgccagagaggctattaaaaaaaaagaattcaaggaggctctaaag
cactgtaaggctgttctaaaactcgagaagaacaactataatgcctgggtgttcattggc
cttgcagccagtgagttggagcagccagaccaggctcagacagcctataaaaaagcagtt
gagctggagcctgagcagcttctagcatggcagggtttggcaaatctttatgagaagact
gatcagtgggattttaaagatgaactacctaatgtctatcagaagcttgttgacctgtat
gcaagctctgacaaaaacaaatgttatgagctgatcagaaagctgttggacatctatcac
tctgacaaagagtatttaaagttggcaaagctttggctgcagttgcttcatctgaaggag
gaagaggctgtggagaggaaagagttactacagttatggcaagagatggcccagctcctc
ttagactgccttaatgaggaggagcagcacggggacatccagcagcatttaatcacagcg
tttgaaaaagccttgagtctaatggatgctgtaccaggggaggaacacaagaaggtttca
cttgactacattagatgtctctccaaacttccaacagaggaaggcagactgaaagaggca
tgtgagtccatgctggccctgtatcccaaccaaagttatccacttgaagttctctgttct
cactatctcaacacaggtgctcaggatgaggttgcagtcagctgtttttcacggctcctg
aatcttgcccctaacagtggactgggccatctgggtctgggcaccaaagccctgcatgaa
gggaggtttaaagatgccattaaggagctccaacaaggtttgaagaaaatgagcctgaat
accggatggtacagtctcgccgaagctcagtttaaaacccacaaatactcagacagtgct
gtgtcatgctctcaaggtctggcactttgtgcttctgaggacgagcaacaaagagaaaaa
ctgctccgactgaagctggaagcgttagttgggagtggaggagaggaagctgccagtgag
gccatggagacattttcacagctctcaggtgctaaagaagaccccgttcttttaatgctg
aaaggccgtgcacacctcaacatgggacacgttgaccaagctttacaggcgtcatcagag
ttgctgtcctcccgtcctaatctggcccaggccttcgtactgagaggactggtccaggtc
gcacagggagagcagcagctggcggaagagagtttcctgaaggcaattagccagagtccg
gactgtggagagtattatttcctgttagggaaactttattgggacatgggagaggcgact
cgtaatgacaggagcaaagcctacacacatctaatcaaggctgcaaagttggacccaaac
gctggtcgtgtgttccactacctgggacgttattaccaggaggtggtgtgtgatcacgga
cgcgcacgaggctgctacaagaaagcttttgacttggacaacgatgatgtggagtctggg
gcggctgcagtggatctcagtatgaaagacgatgatatggacagtgccttagaaatgctc
cagtcagtcatcgagaaagccactccaggatcaggaaaatgggcttggctgagaagagga
ctttactatctgaagattggacagcatcaaaaagctatagctgatctgcaggccgcactg
agggcggaccctgaagactgggtctgttgggagtgtttaggcgaggcctacctgaaccgc
agaagcttcacggcagctttgaaggcctttgggaaggcccatcagctgcatcccggttct
atctacagcgtctaccaggccgccgccatcaaacagacccttggcaagttcaaagaagca
gtcgctgaatatttgcaaatcacagcccaacaggattatgttcccgctcttaaaggtctc
ggggagtgccagttgtccctcgctaagagtctgatggaagactgtagagatgggggagct
gtggaccttattcagcaagcaatcgtaaaccttttcagagctgtggagctgcgtccagac
ctgagctgtttgtggaaactgctgggagatgcttgcacagcagttagcactgtgtcgcca
aacagagcccagctagctatacccgctgctttggccggcttagtccctgacgctcagaat
cagcttttgaaccaggcccaggcacttaaagtcggagagagatgttatgtccgggccttg
aggctgatgcctgaagtccccagtctgtggcatgacctcggactcaactattaccaccag
tcccgcctgccctgcgtctcaggcggggaggagaacgccccgtgcctcctgctagaaaag
gcccaggagtgtctaaaaaaggccgtgatgttggacagtgcaagtcacaaccactggaat
gccttgggagtgatttcaatgagcaaaggtttagagaactttgctctcgctcagcattgc
ttcatcaaatcaattgaagtagagcaaaataatgttgttgcttggacaaatatcggtacc
ctctatctgaagaaggagaacattgagctggcacacaaggctttcaaggtcgctcagtcc
ctggagcctctttatgtcaactgttggattggacaggcactgatagcagagaaggttgga
aactatgacaccatggatctcttcagacacaccacagagctcagcacacatatggagggg
gtgaagggttatgcctactgggtgtgttccaccctgttggataagagcaacagagactct
gaactgtaccgctacaacatagtccagatgaacgccgtctccgcagcacaggtggccctc
accaagtacacggaaaggatccagtgtgaccctgctgccttcatcatgcttggctatttg
aacgaacatctgcatttgaagcggcaggctttacatggttaccaaagagctgtggagctg
cttcagtcctcttcaagagaggagctggtgtttgctctgggcaactatggccgtgcttta
agcactttgggccagtgggacaaagcagcgtgtgtctataaatccacccagcttcaggag
ctcagcgacgtggtcgggctggctctggcctactgcagggctggacgcctcacagagagc
agagatgcctatgacagcgccttggctttggctgccactgagaaggagaaggcctacatc
ctgacggcccaggccctgcttcagcaccggcaggggaacctagacttggccaaaacgctc
ctctttaaatgctcaatgctgaaggagccgatttccgagtctctcctgtgtttatgtgcg
ctgggtttagtccacagtgatgctacattagcatctgctgccctcactgagctgctcaag
caaggtgccccctctggtagcgttgtcgagcagcggtgccttctgacctgtgccttgctg
gccctgcagcgcaactacagcgcagtgcaaagagaggcctcccgagccgtgcacagcaat
cctggaaacgcatctttgtgggctttgctgtccagagtgataccgcagtactaccccagg
aaggccaatggtggagcaacagctggtcatgtagcctgtctgtccagtatgacccaggga
aagagggcgctgttgtacagtggcgtgaaccagctggcgaatgggagacactctggagag
gacagtcacaacaatgcactgaagatgatgcagagggccgtacttctctgtcctgacgat
ccagcaacatgggcgggattaatggctgcctgtcacacagaaaacacttgctgttatctg
tcaggttctgctccaaggagacaaggaatggagcagtctctcatggcaattgtgtctgag
aaagtgtgtgatgtagaggaaattgagcgacctctggctcagtctctggagggatgggtg
ctacaacaggcagtggctggtctcatgttggcaggacagctagaacaagctgaagctctg
tgctctcaggtcctgagtgtttctccagaacatccaggagtgctgctgctgctgaggcag
gttcagtgtcagcggctcctgggggccgctgaccacgccgtcctcccagatggcgttttg
gagcaactgaacaacacggtgatggtgaaccccaccaacctcggtgcgtggcattggctg
gctgaggtgtaccgcggccagggcctgctgctccaggccgtcatggcgtaccggcagagc
ctgcagctggcctcacaactcgggatccacaacagccagttcgcaagcctcctccgcctg
gccctgctggccttaaggccctgcatggcaggtgtccaaggcaaccagtgggcagacttg
atcttagaagccaccgctgaggtcttgaagctgagtccagctcctgtggcgctgcttttc
caggccctgctgcagtttgctaccaaaatgcctgcgagagaaacacggcgttccctggag
aggctgacgtgcgtctcctctcaagacttcccagtcacagtggtgcaggtggccaggtgg
taccttctcaggcatttacatgctaaaggggacgaggaactgataaaggtccatttgcaa
catgcgaaagagagtggagatgaaaggctgctgacatttcattcattgctcaacaaatcc
cagctgtaa
DBGET
integrated database retrieval system
