Takifugu rubripes (torafugu): 115249137
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Entry
115249137 CDS
T02386
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tru04040
]
115249137
Ion channels [BR:
tru04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115249137
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
115249137
NCBI-ProteinID:
XP_029689450
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All DBs
Position
1:complement(19906576..19916380)
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AA seq
1370 aa
AA seq
DB search
MSQCSFLSHLLLPTSGIKRSSIDCNGVVSLVGGNSLPSLPVGLPLPILMGDTTDTEYQGA
DGGPHQEFMDLLEGPEARQRAQSIASVITSTMEELEESRQKCPSCWYTFAETVLIWECCP
VWMKFKKVVNLIVMDPFADLTITICIVLNTLFMAMEHYPMSGSFSRMLTVGNVVFTCIFT
AEMVLKIIALDPYYYFQTGWNIFDGIIVTLSLMELFLANVVGMSVLRSFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTLVLAIVVFIFAVVGMQLFGKNYRDCVCKISANCELPRW
HMSDFFHSFLIVFRVLCGEWIETMWDCMEVSGMTMCIILYMMVMVIGNLVVLNLFLALLL
SSFSADKMLANEDDSDTNNLQIAIARIQRGIAFVKAFIQSRCRSACLRGEKAGKAEDKSL
DELHKPTGPNGVPNHTLKNFAKNGNGVDKSGDKYIVSSRSDDSIMSFINNPSLTITVPIA
VGESDFENLNTEDFSSVSSEAACHVNVEEDDDEYSSSEGSTVDCPLDGERGESVDFELDK
AMEPDACFFDGCVQRFQCCQVNVEAGWGKMWWTLRKTCYRIVEHSWFESFIIFMILLSSG
ALACEDINSEKRKTVKILLEFADKIFTYIFILEMLLKWVAYGFAKYFTNAWCWLDFLIVD
VSLISLVANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIFNVLLV
CLIFWLIFSIMGVNLFAGKFRMCIRRTTNQPFLPTEVKTKNDCINLGQDVARWTNLKVNF
DNVGLGYLALLQVATFKGWTDLMYAAVDSQSKPDEQPDYEINLKMYLYFVVFIIFGAFFT
LNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKIQGYI
FDFTTKQAFDIVIMVLIWLNMVTMMVETADQSEEMGRILYNINVVFIVIFTGECLLKMIS
LRHYFFTNGWNIFDFIVVILSIIGVFLSELIENYFVSPTLFRVIRLARIGRVLRLIKSAK
GIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESDIDDMFNFETFGNSM
LCLFQITTSGGWDKLLAPILNKHADDCDNSTEHPGSSVKGDCGNPPVGIAFFVSYIIICF
LIVVNMYIAVILENFGVATEESADPLSEDDFEMFYEVWERFDPRATQFMEFNKLSDFADS
LDPPLCLPKPNKLELISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILREQMEVRFM
ASNPSKVSYEPITTTLRRKLEDTSATVIQRAYRQYASQRSPVKSPVAVNDIQRDRTIDDK
EDGNTDAPKEISGTDESEQTPPMACNSVAASGKHKYEKDKSEREVECKDV
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtgcagcttcttgtcgcatcttctgcttccaaccagtgggatcaagcgcagc
tctatagactgcaatggggttgtttctctggtgggtgggaattcactcccgtcgttacct
gtggggctccctctgcctatactgatgggtgacaccactgacacagagtaccaaggagca
gacgggggacctcaccaggagtttatggacctcctggagggcccggaggccaggcagaga
gctcaaagtatagctagtgtcataacaagcacaatggaggagctggaagagtcaagacag
aagtgcccctcatgctggtacacttttgcagaaaccgtcctcatctgggaatgttgtcca
gtatggatgaagttcaagaaagtggtcaacctgattgtaatggatccatttgcggactta
actatcaccatctgcattgtactaaacacactgtttatggccatggagcattatccaatg
tctggcagcttcagcagaatgctgactgtgggcaatgtggtgttcacctgcatcttcact
gctgaaatggtgctcaagatcatcgctttggacccatattattactttcagacagggtgg
aatattttcgatggcatcattgtcaccttaagcctaatggaactgtttttggcaaatgtg
gttggcatgtctgttctcagatcattccgactgctcagagtcttcaagttggctaaatcg
tggcccactcttaacaccctgatcaaaattattggcaattcagttggggctttgggcaac
ctgaccctggtgctggccatcgtggtgttcatctttgctgtggtgggcatgcagctgttt
ggaaaaaactacagggactgtgtgtgcaaaatctccgccaactgcgagctgcccaggtgg
cacatgagtgacttcttccattcattcctcattgtgttccgagtgctttgtggagagtgg
atagagaccatgtgggactgtatggaggtgtctgggatgaccatgtgcatcattctctac
atgatggtcatggttatcggaaaccttgtggtgctgaatctcttcctggccctgctgctg
agttcattcagcgctgacaaaatgttagcgaacgaagatgacagtgacacaaacaatttg
cagatagcaatcgcccgcattcaaagaggcatcgccttcgtcaaggctttcatccaaagc
aggtgcagaagtgcctgcctccgaggggagaaggcagggaaggccgaggacaagtctctg
gatgagctccacaagcctacagggcccaacggagtccccaaccacacgctgaaaaacttt
gctaagaacggcaatggggtggacaaaagtggagacaagtacatcgtcagcagcaggagc
gatgactccatcatgtccttcatcaacaaccccagcctgaccatcacagtccccatcgct
gtgggagagtccgactttgaaaacctcaacacagaagacttcagcagcgtctcatctgaa
gcagcgtgccatgtgaatgtagaagaagacgacgacgagtacagctcctctgagggcagc
acagtggactgtcccctggacggcgagagaggggagtcggtggactttgaactcgacaaa
gctatggaaccggacgcctgcttttttgacggctgcgtgcaaaggttccagtgctgccag
gtaaacgtggaggcgggctgggggaaaatgtggtggacgctgagaaaaacctgctaccga
atagtagagcacagctggttcgagagctttatcatcttcatgatcctgctcagcagcgga
gcgctggcatgtgaagatatcaacagcgagaagaggaagacagttaaaatcttgttggag
tttgcagataaaatcttcacctatattttcattctggagatgctactgaagtgggtggcc
tatggatttgccaagtacttcacaaatgcttggtgctggctggacttcctcattgttgat
gtgtcactgatcagtttggtagccaatgcactgggatattctgaactgggtgctataaaa
tctctgagaaccctgagagccctaaggcccctgagagccctttcacgctttgaaggcatg
agggtggttgtcaatgctctgttaggagccataccttctatcttcaatgtgctgctggta
tgtctcatcttctggctcatcttcagcatcatgggagtgaatttgtttgcgggaaagttc
cgaatgtgtatccgcagaaccacaaatcagcctttccttccaacagaagtgaaaacaaag
aatgattgtatcaatttaggccaagatgttgctcgttggacaaatctaaaagttaacttt
gacaatgttggcctgggctatcttgcactgctgcaagtggctacatttaaggggtggacg
gacctcatgtacgctgctgtggactcccaaagcaagcctgatgaacagccagactatgaa
atcaacctaaagatgtacctgtattttgtggttttcattatatttggagcttttttcaca
ctcaacctctttatcggcgtcatcattgacaatttcaatcagcaaaagaaaaagttaggt
ggtcaagacatcttcatgactgaagagcagaagaaatactacaacgccatgaaaaagcta
gggtcaaagaagccacaaaaacccattccaagaccatcaaacaaaattcaagggtacatc
ttcgacttcaccacaaaacaagccttcgatattgtgataatggtcctaatatggctcaac
atggtgactatgatggtggaaactgccgaccagtccgaagaaatgggcagaattctctac
aatattaatgtggtgttcattgtcatcttcacgggagagtgcttgttgaagatgatctcc
cttcgtcactactttttcacaaatgggtggaatatatttgatttcatcgtcgtcatccta
tcaatcatcggtgtgtttctctcagagttgatcgagaattattttgtctcgccgaccctg
ttcagagtcatccgactggctcggatcggccgcgtcctccgtcttatcaaaagtgccaaa
ggaatccgcacactcttgtttgccttgatgatgtcacttcctgccttgttcaacatcggc
cttttgctcttcctggtgatgtttatctacgccatctttggcatgtccaacttcgcttac
gtcaagaaggaatcggacatcgacgacatgtttaactttgagacattcggcaacagcatg
ctctgtttgttccagatcaccacctctggggggtgggacaagcttctggctccaatcctc
aacaaacacgcagatgactgtgacaatagcacagagcaccctggcagttccgttaaaggg
gactgtggaaatcctcctgtgggcattgccttcttcgtgagctacattatcatatgcttc
ctgattgtggtcaacatgtacattgcagttatcctggaaaactttggggtggccaccgag
gaaagcgcagacccactgagcgaggacgactttgaaatgttttacgaggtctgggaaagg
ttcgatcctcgtgcgacgcagttcatggagttcaataagctctcagacttcgcggactcc
ctggacccgcccttatgcttacccaaacccaacaagcttgagctaatctccatggaccta
cccatggtgagcggggaacgcattcactgtctggacatcctctttgcattcacaaaacgg
gttctgggcgagggcggcgagatggacatcctcagggagcagatggaggtgcgtttcatg
gcttccaatccttccaaagtgtcctacgagcccataaccaccaccctccgccgcaaactg
gaggacacatcagccaccgtcatccagcgggcttacagacagtacgcaagccaacggtct
cctgtcaagagccccgtagcagtgaatgatattcaaagggacagaacaatcgatgataag
gaggatggcaacacagacgcacccaaagaaatttccggcaccgacgaaagcgaacagacg
cctccgatggcgtgtaacagcgtggcagcgagcggcaaacataaatacgaaaaggacaaa
agcgaaagggaggttgagtgtaaagatgtgtaa
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