KEGG   Tropicibacter oceani: QF118_13400
Entry
QF118_13400       CDS       T09169                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
try  Tropicibacter oceani
Pathway
try00230  Purine metabolism
try00240  Pyrimidine metabolism
try01100  Metabolic pathways
try01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:try00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    QF118_13400
   00240 Pyrimidine metabolism
    QF118_13400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:try03400]
    QF118_13400
Enzymes [BR:try01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     QF118_13400
DNA repair and recombination proteins [BR:try03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    QF118_13400
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: WGW02923
UniProt: A0ABY8QEQ1
LinkDB
Position
complement(2788284..2791958)
AA seq 1224 aa
MKIERKFTKAGQDAYEGIEFTTTTSEIRNPDGKVVFKQDNLEVPAKWSQVASDVIAQKYF
RKAGVPAELKKVKEKGVPEFLWRSAPATAKTERIGETSAKQVFDRLAGAWTYWGWKGGYF
TTEADAQAYFDEMRYMLCTQMAAPNSPQWFNTGLHWAYGIDGPGQGHYYVDFQTGELTKS
TSAYEHPQPHACFIQSVKDDLVGDGGIMDLWVREARLFKYGSGTGTNFSSLRAANEPLSG
GGKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVICDVDHPDIEEFINWKVLEEQKVASI
VAGSKMHEKMLNGIFAAIKVWDGAEADAYDPAKNEALKGAIRAAKGVMIPETYIKRVLDY
ARQGYASIEFPTYDTDWDSEAYASVSGQNSNNSIRVTDAFLKAVREDKEWELIRRTDGSV
AKTVSARDLWENVGHAAWACADPGIQFHDTVNAWHTCPEDGEIRGSNPCSEYMFLDDTAC
NLASMNLLTFLHGGKFDAESYMHATRLWTLTLEISVTMAQFPSKEIAQRSYDFRTLGLGY
ANIGGLLMNMGFGYDSDEGRALCGALTAIMTGVAYATSAEMAGELGAFSKYEKNSKHMLR
VIRNHRNAAYGATTGYEDLAIKPVPLDHAHCPDADLVELAMGAWDEALELGKKHGYRNAQ
TSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINHSVPAALDKLGYGSAQI
EEIIGYAVGHGTLGNAPGINHTSLIGHGFGPRQIEKIEAALATAFDIRFVFNQWTLGEEF
CRETLGIPATKLNDPTFDMLKHLGFSKREVEAANDHVCGTMTLEGAPHLKDEHLNVFDCA
NACGKKGKRYLSVNSHITMMAAAQSFISGAISKTINMANDASIEDCQKAYELSWSLGVKA
NALYRDGSKLSQPLAAALVEDDDEAAEVLESGSTQEKAKVLAEKIVEKVVIKEIIKSQRT
KMPERRKGYTQKAIVGGHKVYLRTGEYQDGSLGEIFIDMHKEGAGFRAMMNNFAIAVSVG
LQYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVKP
EGATFDDIGRGEEEGVSNVKELSESAASRSLEVLKQISSTGYLRKRLPQELIVLQGGQAG
GVAFAQTGTDPVQALSTLVPETGLGAAATSTVAVTSGTMSMDQRTKAKMQGYEGDPCGEC
GNYTLVRNGTCMKCNTCGSTSGCS
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgaaaatcgaaagaaaattcaccaaggcagggcaggacgcttacgagggtatcgaattc
acgacgacgacgtcggaaattcgcaacccggacggcaaggtcgtgttcaagcaggacaac
ctcgaagtgcccgccaagtggagccaggtcgcaagcgacgtgatcgcccagaagtatttc
cgcaaagccggcgttccggctgagctgaagaaggtcaaggaaaagggcgtgcccgagttc
ctgtggcgctcggcgcccgccacggccaagaccgagcgcatcggcgaaaccagcgccaag
caggtctttgatcgcctggccggggcctggacctattggggctggaaaggtggctatttc
accaccgaggccgacgcccaggcctatttcgacgaaatgcgctatatgctgtgtacccag
atggccgcaccgaacagcccgcagtggttcaacaccggtctgcattgggcctacggcatc
gacggtccggggcaggggcattactatgtcgacttccagaccggcgagctgaccaaatcc
accagcgcctatgagcacccgcagccgcacgcctgtttcatccagtcggtcaaggacgat
ctggtgggggacggcggcatcatggacctgtgggtccgcgaggcacgcctgttcaagtac
gggtccggcaccggcaccaacttctcctccttgcgcgccgcgaatgaaccgctgtcgggt
ggtggcaaatcctcgggcctgatgggctttctcaagatcggtgaccgggcggcgggcgcc
atcaagtcgggcggcaccacgcgccgcgccgccaagatggtgatctgtgacgtcgatcac
cccgatatcgaggaattcatcaactggaaggtgctcgaagaacagaaggtggcgtccatc
gtcgccggctccaagatgcacgaaaagatgctgaacggcatcttcgcggcgatcaaggtc
tgggacggcgccgaagccgacgcctatgaccccgccaagaacgaggcgctcaagggcgcg
atccgcgccgccaagggcgtgatgatccccgagacatatatcaagcgcgtgctggactat
gcgcggcagggctatgccagcatcgaattcccgacctatgacaccgattgggacagcgaa
gcctatgcaagcgtgtcgggccagaactccaacaactcgatccgcgtcaccgatgccttc
cttaaggccgtgcgcgaagacaaggaatgggagctgatccgccgcaccgatggcagcgtc
gccaaaaccgtcagcgcccgcgacctgtgggaaaacgtcggtcacgcggcctgggcctgc
gccgatcccggcatccagttccacgacaccgtcaacgcctggcacacctgccccgaagac
ggcgagatccgcggctcgaacccctgttcggaatacatgttcctggacgacacggcctgt
aacctggcctcgatgaacctgctgaccttcctgcacggcggcaagttcgacgcagaaagc
tatatgcacgccacgcgtctgtggaccctgacgctggaaatcagcgtgaccatggcgcag
ttcccctccaaggaaatcgcgcagcggtcctatgatttccgtacgctgggccttggctat
gccaacatcggcggtctgctgatgaacatgggctttggctatgacagcgacgaaggccgc
gcgctgtgcggtgccctgactgcgatcatgaccggcgtcgcctatgccacctcggccgaa
atggcgggtgaactgggtgccttctcgaaatacgagaagaacagcaagcacatgctgcgc
gtcatccgcaaccaccgcaacgccgcctatggcgcgaccaccggctacgaagacctggcg
atcaagccggtgccgctggaccacgcccattgccccgatgccgacctggtcgaactggcc
atgggcgcctgggacgaggcgctggaactgggcaagaagcacggttaccgcaacgcccag
accagcgtgatcgcccccacgggcaccatcggtctggtcatggattgcgacaccaccggg
atcgagcccgactttgccctggtcaagttcaagaagctggccggtggcggctacttcaag
atcatcaaccattcggtgccggcggcgctggacaagctgggctatggcagcgcgcagatc
gaagagatcatcggctatgccgtcggtcacggcacgctgggcaatgctccggggatcaac
cacacctcgctgatcggtcacggctttggcccgcgccagatcgaaaagatcgaggccgcg
ctggccacggcctttgacatccggttcgtgttcaaccagtggaccctgggcgaagagttc
tgccgcgagacgctgggcattccggcgaccaagctgaacgacccgacctttgacatgctc
aagcaccttggtttctccaagcgcgaggtcgaggccgccaacgatcacgtctgcggaacc
atgacgctggaaggcgcgccgcacctcaaggacgaacacctgaacgtctttgactgcgcc
aacgcctgcggcaagaagggcaagcgttacctgtcggtcaacagccacatcaccatgatg
gccgctgcgcagtcgttcatctcgggcgcgatctcgaaaaccatcaacatggcgaatgac
gccagcatcgaggattgccagaaggcctacgagctgtcctggtcgctgggtgtgaaggcc
aacgcgctgtaccgtgacggatccaagctgtcgcagcctctggccgccgcgctggtcgag
gatgacgacgaggccgccgaggtgctggaaagcggctcgacccaggaaaaggccaaggtc
ctggccgagaagatcgtcgaaaaggtggtcatcaaggagatcatcaagtcgcagcgcacc
aagatgccggaacgccgcaagggctatacccaaaaggccatcgtcggcgggcacaaggtt
tacctgcgcaccggtgaataccaggacggcagccttggcgagatcttcatcgacatgcac
aaggaaggcgccggtttccgggcgatgatgaacaactttgccatcgccgtgtcggttggt
ctgcaatacggcgtgccgctggaggagttcgtcgacgccttcacctttaccaagttcgaa
ccggcgggcatggttcagggcaacgacagcatcaagaatgccacctcgatcctggactat
atcttccgcgaactggcggtgtcctacctggatcgcaccgatctggcccatgtcaaaccc
gaaggcgcgacctttgacgacatcggccgcggcgaggaagagggcgtgtccaacgtcaag
gaactgtccgaaagcgccgcgtcgcgcagcctcgaggtgctcaagcagatcagttcgacc
ggctatctgcgcaagcgcctgccgcaggaactgatcgtgcttcagggcggtcaggcgggc
ggggtggcctttgcccagaccggcaccgatccggtgcaggcgctcagcacgctggtgccc
gaaaccgggcttggcgctgccgcgacctcgacggtggccgtgaccagcggcaccatgtcg
atggaccagcgcaccaaggccaagatgcagggctacgagggcgatccttgcggcgaatgc
ggcaactacacgctggtgcgcaacggcacctgcatgaagtgcaacacctgcgggtccacc
tcgggctgcagctga

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