Thiothrix subterranea: HMY34_14225
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Entry
HMY34_14225 CDS
T07831
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMY34_14225 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsb03019
]
HMY34_14225 (recQ)
03400 DNA repair and recombination proteins [BR:
tsb03400
]
HMY34_14225 (recQ)
Enzymes [BR:
tsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMY34_14225 (recQ)
Messenger RNA biogenesis [BR:
tsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMY34_14225 (recQ)
DNA repair and recombination proteins [BR:
tsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMY34_14225 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
VMAP-M0
ResIII
Motif
Other DBs
NCBI-ProteinID:
QQZ29825
LinkDB
All DBs
Position
2867957..2869789
Genome browser
AA seq
610 aa
AA seq
DB search
MQRAYHILNNTYGYTDFRLNQRDIIGSLLQDHDVLALMPTGGGKSLCYQIPALVRDGVGI
IVSPLIALMQDQVDALLQLGIRAAYLNSTLNYGAVQRVERELLAGEIDLLYVAPERLLSE
KMLPLLERLHTTIGISLFAIDEAHCVSQWGHDFRPEYQQLSMLAERFPGVPRIALTATAD
QRTRQEIIEQLRLQRADIYVNSFDRPNIHYTIQQGQQARQQLWQFIDAHHSQDAGIVYCL
SRKKVEDTAAWLAQQGRTALPYHAGMDADTRRHHQQRFLREDGVIIVATIAFGMGIDKPD
VRFVAHLSLPKSIEAYYQETGRAGRDGLPANAWMSYGLQDVITLRQMMLESTASEQQKRI
EHHKLQAMLGLCEMTTCRRQALLSYFGEPTPQPCGNCDNCRNPPEVWEAAVAAQKALSCV
YRTGQRFGVNYIIEVLLGKDDERIRQFRHEQLSTFGIGKEHSEAEWRNIFRQLIALGYLT
VDVDGHGGLRLTDNARPLLRGEIELHLRKEQKRERVRRDRVRGDPVAKPRFNRDTMPIEV
EALWEALRALRLRLSQEQGVPPYVIFHDSTLLQMADERPQTLEAMRGIAGIGERKLAQYG
QAFLDVVLGA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtgcctaccacattctcaacaacacctatggctataccgattttcgcctgaat
cagcgcgatattatcggctcattgctgcaagaccacgatgttctcgcgctcatgccgacg
ggcggcggtaaatcgctgtgttaccagattccggcgttggtgcgcgatggcgtgggcatt
atcgtgtcgccgctgattgcgttgatgcaggatcaggtcgatgccttgctgcaactcggt
atccgtgccgcttacctcaattccacgctcaactacggtgcggtgcagcgggtagaacgc
gaattgctggcgggtgaaatcgacctgctctacgttgcacccgaacgtttgctcagcgaa
aaaatgctgcccttgctggaacgtttgcacaccaccatcggtatcagcctgttcgctatc
gacgaagcacattgtgtgtcgcaatgggggcatgatttccgaccggaataccagcaattg
tcgatgctggcagaacgtttccccggtgtgccgcgcattgcgctgacggcgacggcggat
cagcgtactcgtcaggaaatcattgagcagttgcgcctgcaacgcgccgatatttacgtc
aacagttttgaccgccccaatatccactacaccatccagcaggggcagcaggcgcggcaa
caattgtggcagtttatcgacgcgcatcattcgcaggatgcggggattgtttactgcctg
tcgcgcaaaaaggtcgaagataccgccgcgtggctggcgcaacaggggcgcaccgccttg
ccgtatcatgcggggatggatgcggatacgcgccgtcatcatcagcaacgtttcctgcgc
gaagatggcgtgatcatcgttgccaccatcgccttcggcatggggattgataagccggat
gtgcgtttcgtggcgcatttgagcttgccgaaaagcatcgaagcctattatcaggaaacc
gggcgggcggggcgtgacggtttgcccgcgaatgcgtggatgtcgtatggcctgcaagat
gtcatcactttgcgccagatgatgctggaatccaccgccagcgagcagcaaaagcgcatc
gaacaccacaagctgcaagcgatgttgggcttgtgcgaaatgaccacctgccgccgccaa
gccttgttgagctacttcggtgaaccgaccccgcaaccgtgtggcaattgcgataattgc
cggaatccgccggaagtgtgggaagcagcggtggcggcgcaaaaagccttgtcgtgcgtg
taccgcaccgggcagcgtttcggggtgaattacattatcgaggtgttgctgggcaaggat
gatgagcgcatccgccagtttcgccacgaacagctttccacctttgggattggtaaggag
cattcggaggcggaatggcgcaatattttccgccaactgattgcgctggggtatttgacg
gtggatgtggacgggcatggcggtttgcgtttgaccgataacgcccgcccgttattgcgc
ggggaaattgagctgcatttgcgcaaagagcagaagcgcgaacgggtgcggcgtgatcgt
gtgcggggtgatcctgtcgccaaacctcggtttaatcgcgataccatgcccattgaggtg
gaagccttgtgggaagctttgcgtgcgctgcgcctacgcttgtcacaggaacagggtgtg
ccgccgtatgtcattttccacgattccaccttgctgcaaatggcggatgaacgcccgcaa
acgctggaggcgatgcggggtattgcggggataggggagcgtaagttggcgcagtatggg
caggcgtttttggatgtggtgttgggggcgtga
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