Thiosulfatimonas sediminis: THMIRHAS_19270
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Entry
THMIRHAS_19270 CDS
T06859
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse00470
D-Amino acid metabolism
tse00550
Peptidoglycan biosynthesis
tse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
THMIRHAS_19270 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
THMIRHAS_19270 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tse01011
]
THMIRHAS_19270 (murD)
Enzymes [BR:
tse01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
THMIRHAS_19270 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tse01011
]
Precursor biosynthesis
Amino acid ligase
THMIRHAS_19270 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
CbiA
NYN
Motif
Other DBs
NCBI-ProteinID:
BBP46554
UniProt:
A0A6F8PX24
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All DBs
Position
complement(2082536..2083918)
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AA seq
460 aa
AA seq
DB search
MIMVAGLGITGQSVLRFLQTQQERCYAFDTRADFDIRPLRLQFPQVQFACGELPKRWREQ
VKTLVLSPGIDQREPWVQQLIKQGVEVIGDIELFARAVGVPVVAITGSNGKSTVTTLIGE
ALKTAGYEVAVAGNIGLPALDALLDERDYEVYVLELSSFQLETTYSLHSISATVLNISED
HMDRYDHMAAYTQAKCKVFDDTELAVLPTDLNLTGLGAVRQIRFGIEPPQSEHDYGLMER
EGQVYLAKGAQPLVNCAQMLLQGAHHQLNALAMMALCEPFEVSKQVFSQVLTNFSGLPHR
TQLVTEVNSVQWINDSKGTNVGATLTALQTFGPQIDGKIVLLAGGVSKDADFSSLLPTVQ
AYCSVTILFGRDREIIAQALREHCDVCLVETLAEAVAMAASRVQSGDCVLFSPACASFDQ
FKNYAQRGEIFKEIVQQQFASPGVSGDAESSHRIAEHTRN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggtcgccggtttaggaattacagggcagtcggtattgcgtttcctgcagaca
cagcaagaacgctgttacgcatttgacactcgtgcggattttgatattcggcctttgcgt
ttgcagtttccacaggtgcagtttgcttgtggtgaactgcccaaacgctggcgtgagcaa
gtgaaaaccttggtgctcagtccaggcattgatcagcgcgaaccttgggtgcaacagctg
attaagcaaggcgttgaagtgattggcgatattgaactgtttgccagagccgtcggtgtt
ccggtggtggcgattaccggttctaatggcaaaagcacagtcacaaccttgattggcgaa
gcgcttaaaacggcgggttatgaagtcgcggtagccggtaatattggtttacctgctttg
gacgctttgttagatgagcgtgactatgaagtctatgtactggaattgtcgagctttcag
ctggaaaccacctattcattgcacagtatttcagccacggtgttgaatatcagtgaagat
catatggatcgctacgatcatatggccgcgtacacacaagccaaatgtaaagtgtttgat
gatactgaattggcggttttaccgacggatttaaatttgaccggtttaggcgcagtgcgc
caaattcgttttggaatagagccgccacaaagtgagcatgactacggtttaatggagcgc
gaagggcaagtctacttggcgaaaggggcgcagcctttggtgaactgtgcgcaaatgcta
ttacaaggggcgcatcatcaattaaacgccttagcgatgatggcgctgtgcgaacctttc
gaagtttccaagcaagttttttcgcaagtgctgacgaatttttccggtttgccgcaccgt
acgcagttggtgacagaagttaattcggtacagtggattaatgattccaaagggacaaac
gttggcgcaaccttgaccgctttgcagacatttgggccgcaaattgatggaaaaattgta
cttttggctggtggtgtcagtaaggacgcggatttttcatcgctattacccactgtgcaa
gcgtattgttcggtcaccattttgtttgggcgtgatcgtgaaatcattgctcaggcattg
cgcgagcattgcgatgtttgcttggtggaaaccttggcggaagccgttgccatggcggca
agccgtgtgcagagcggcgattgcgtcttgttttcacctgcttgcgccagttttgaccaa
tttaaaaactatgcgcaacgcggcgaaatttttaaagagattgtgcagcagcagttcgct
tctcctggcgtctcgggcgatgccgaatcgagtcaccggattgccgagcacacacgcaat
taa
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