Thiosulfatimonas sediminis: THMIRHAS_24100
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Entry
THMIRHAS_24100 CDS
T06859
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tse
Thiosulfatimonas sediminis
Pathway
tse03030
DNA replication
tse03430
Mismatch repair
tse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THMIRHAS_24100
03430 Mismatch repair
THMIRHAS_24100
03440 Homologous recombination
THMIRHAS_24100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tse03032
]
THMIRHAS_24100
03400 DNA repair and recombination proteins [BR:
tse03400
]
THMIRHAS_24100
Enzymes [BR:
tse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
THMIRHAS_24100
DNA replication proteins [BR:
tse03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
THMIRHAS_24100
DNA repair and recombination proteins [BR:
tse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
THMIRHAS_24100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DNA_pol_A_exo1
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
BBP47037
UniProt:
A0A6F8PYB5
LinkDB
All DBs
Position
complement(2618583..2620103)
Genome browser
AA seq
506 aa
AA seq
DB search
MPIDLNPELFTDLALGLQEVPLAGFPDRFFILDCETTGGKALRDRITELAWIKIENGQVV
GHWHSLFDPQTTIPPWITNITGIHNSMVQDAPTFSQMAEEIAEQLDGEIVVAHNARFDYG
FLKNEFKRCGKAFHVKTLCSVKISRKLFPQVKGHGLDNILKRMRLTLKNRHRAMSDVLAV
LAFFQKISQQFDADEVSAVCQSLLKSAALPSHLAQEEVQKLPNLAGVYYFYDEAGKLLYV
GKSVDIKTRVLSHFYQDHQTATDLRLSKTLHHIDFQVTPSDFGAQILESQEVKRLRPSLN
KRLKKVTQLYQLRLEEDEHGYLQTNVVAVKEDADSGEQRFGLFRSQRQAKGQLEKLVKNY
LLCQRLSGLEGKHSGSCFAYQLKKCMGACCQKEPVASYNTRLMGALQHLQKQVWPWSGPI
LVGERVSGTDVDENDESQVAHHLVDQWCYFGRVRNEDEVAERLQSGLPEFDLDIYFILLR
FLLEEQSIKDNGLQLQQLDSQLRSIA
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccgattgacctcaatcccgaactgtttaccgacttggcgttaggtttgcaagaggtg
ccgttagcaggctttcccgatcggttttttattcttgattgcgaaaccaccggtgggaag
gcgttgcgtgaccgcattaccgagctggcgtggattaaaattgaaaacggccaagtggtc
ggtcattggcattcgctgttcgatccgcaaaccaccataccgccgtggatcaccaatatc
accggcattcacaattcgatggtgcaggatgcgccgacctttagccagatggccgaggaa
attgccgagcagctggatggtgaaattgtggtcgcgcacaacgcacgtttcgattacggc
tttcttaaaaatgagttcaaacgctgcggcaaagcgtttcacgtgaaaacattgtgctcg
gttaaaatcagccgcaagctgtttccgcaggtgaaagggcacggcttggataacattctc
aagcggatgcgcttaaccttgaaaaaccggcatagagccatgagcgatgtgctggcggtg
ttggctttttttcaaaagatttcccagcagttcgatgccgacgaagtgtctgctgtgtgc
caatcgttattgaagagcgccgcgctgccgagtcatttagcgcaggaagaagtacagaag
ttaccgaatctggctggggtctattacttctatgacgaagccggtaagttactgtatgtc
ggcaagtcggtagatatcaaaactcgcgtattgagtcatttctatcaagaccatcaaacc
gcgaccgatttacgcttgagcaaaaccctccaccatatcgattttcaagtgacgccatcg
gatttcggtgcgcagattttagagtcgcaagaggtcaagcgtttgcgcccgagcttgaat
aagcggctgaaaaaggtcacccagttgtaccagttacgcttagaagaggatgaacacggt
tatctgcaaaccaacgtggttgcggtgaaagaagatgccgacagcggcgagcagcgtttc
ggtttgtttcgcagtcaacggcaggccaaaggacagttggaaaaattggtcaaaaactat
ctgctctgccagcgactcagcggcctggaaggtaagcacagcggcagttgttttgcctat
cagctaaaaaaatgcatgggtgcctgttgtcaaaaagaaccggtcgcgagctataacacg
cggctcatgggggctttacagcatctgcaaaaacaggtctggccgtggagcgggccgatt
ctggtaggcgagcgggttagtggcacagatgttgacgaaaatgatgagtcgcaagtggcg
catcacttggttgaccagtggtgttatttcggcagagtgcgcaatgaagacgaggtcgcc
gagcgtttacagagcggcctgccggagtttgatttggatatttatttcattttgctgcgc
tttttattggaagagcaaagcatcaaagacaatggcttgcagctgcaacaactggacagt
caattgaggagcattgcatga
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