Trachymyrmex septentrionalis: 108746998
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Entry
108746998 CDS
T11226
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep00450
Selenocompound metabolism
tsep00970
Aminoacyl-tRNA biosynthesis
tsep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
108746998
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108746998
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsep01007
]
108746998
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsep03016
]
108746998
Enzymes [BR:
tsep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
108746998
Amino acid related enzymes [BR:
tsep01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108746998
Transfer RNA biogenesis [BR:
tsep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108746998
Prokaryotic type
Other AARSs
108746998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_N_5
Anticodon_1
Arc1p_N_like
DUF7032
Kbp-5
Motif
Other DBs
NCBI-GeneID:
108746998
NCBI-ProteinID:
XP_018339699
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MIVSTNEGNPNALKLVIATKLAQETVSIRILKPSNATLGRLPTLTTSTGLSLFSISSALR
FLLSVPKEVEVFNDRWLEWEISQLQPAILSHTSAKTCKTLQKSYLWSLLKDLNNELRDKQ
YLIEKCSNLSPADISIWVSLWSTILITDIANDIAKDLPSVNSWLANIQKQPIIQQSIKES
IEMFKLERGSKAIASIEAASWFPINTASNPQVHESVPSDISPTKEKEMDIVNQEELCNMA
KSWTTEQYPEVKESSYPILPKKDERNMLITSALPYVNNVPHLGNIIGCVLSADIFARYCR
QRNYNTLYICGTDEYGTATEAKALQEKTTPQAICDKFFDIHNDVYRWFGIGFDYFGRTST
PEQTEIVQGFFLNIKSQGYVLTETVEQLHCESCDRFLADRFVEGTCPGCKYEDARGDQCD
GCGHLVNAVELINPRCKICNTKPVVKNSIQFFLDLPKLEEKLKEYSTTRDKGWSNIARVV
SKAWLRDGLQPRCITRDLKWGIPVPVEGFENKVFYVWFDAPFGYISITKRYTKEYKQWWQ
PSAQDIKIDLYQFMAKDNIPFHTIMFPACLLAANQNYTLMKCILATEYLNYEDKKFSKSR
GIGVFGTDARDTGIPADVWRFYLAYIRPETQDSNFNWVDLATKNNSELLNNLGNFVNRAL
VFSEKFFNSNIPPIEPEEADWTVLALAQRELSAYINAMEQGKLKDGLKRILAISKHGNQY
MQFQQPWVKIKGNDNDKKKAGTVVAICCNLACLLSALLAPFMPSTAKQLRSQLGLNNKSY
GYIPEIITNMLPTWHKIGKPSPLFTKIEDQKVEMLRKKYAGQQETNGDGTNKSSDESIAI
LEAAITKQGNLVRELKAKNDKSIWQPQVEILLDLKKKLTDLKSNANAPAKKSPAKNKKAE
PMHVPEQNGNALTDVAALESAIAKQGNLVRELKTKEDGSVWKPQVEILLKLKQRLSDLTG
TTPVVVDKKSKKKK
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgattgtttctacgaatgagggtaacccaaacgcactgaaactagttattgcaactaaa
ttagcgcaggaaaccgtctccattaggattctgaagcctagtaatgctactctgggccgt
ttgccgacgctgactacatccacaggattatctctgttcagtatctcgtcagcgttgcgc
ttcctgttatctgtacctaaagaagtagaggttttcaatgacagatggttggaatgggaa
atttctcaattacaaccagccatattaagtcacacgagtgctaaaacttgtaaaactcta
caaaaatcctacttatggtctttactaaaagatctcaataatgaattgagagacaaacag
tacttaattgaaaaatgtagtaacttatcaccagcagatatttctatttgggtaagtctt
tggagcactatattgattacagatatcgcaaatgatattgccaaggacttaccaagtgtc
aatagctggttagctaatattcaaaagcagccaattattcaacaatcaattaaggaatct
attgaaatgttcaaattagaaagaggttcaaaagctattgcaagtattgaagctgcttct
tggttccctatcaatacagcctcaaatcctcaagttcatgaatcagtacctagtgatatt
agcccaactaaagaaaaagagatggatatcgttaatcaagaagaactttgtaatatggca
aagagctggaccactgaacaatatccagaagtcaaagaaagttcatatcctatactgcct
aaaaaagatgaacgaaatatgttgataacatcagcgcttccttacgttaataatgtcccg
catctaggaaatattattggctgtgttctttcagccgatatctttgcaaggtattgcagg
caaagaaattacaatactctttacatatgtggaaccgacgagtatggcactgcgactgaa
gcaaaagctctgcaagaaaaaacgactcctcaagctatttgtgataaattttttgatata
cacaatgatgtttaccgctggttcggcatcggcttcgactatttcggccgcactagtaca
cccgagcagacagaaatcgttcaagggtttttcctaaatattaaatcgcaaggctacgtg
ttaaccgaaactgtggaacaactacattgtgaatcctgtgatcggtttctcgctgataga
tttgtggaaggcacgtgtcctggatgtaagtacgaagacgcgcgcggcgatcaatgcgat
ggttgcggtcatctcgtcaacgcagtcgagttaataaaccctcgatgtaagatctgtaac
actaaacctgttgtgaaaaactcaatacagttcttcctggatttacccaagttagaagag
aaactgaaggaatattccactacacgtgataaaggatggtccaacatcgcgagagtggtt
tcaaaagcgtggttacgcgatggtcttcagcctcgttgcataactagagatttgaagtgg
ggaatacctgtcccagtagaaggtttcgaaaataaggtgttttacgtctggtttgacgct
cctttcggatatatcagtattacaaagaggtatactaaagaatataagcaatggtggcaa
ccttctgctcaggatataaaaatcgatttgtaccaatttatggcaaaggataacattcca
ttccacacgataatgtttcccgcttgtttattagcggctaatcaaaattatacgttgatg
aaatgtatactggcaactgaatatttaaattatgaggataagaaattctccaaatctaga
ggtatcggagtattcggaaccgatgcgagagataccggaattccagccgatgtatggcga
ttttatttagcttacattagacccgaaactcaagattccaattttaattgggtggattta
gccacgaaaaataatagcgaattactaaataatctcggcaattttgtcaacagagctcta
gtattctctgaaaaattcttcaactctaatataccaccgatagagccggaagaggccgat
tggactgtattagcattggctcaacgtgaattgtcagcttatataaacgccatggagcaa
ggcaaattgaaagatggcttaaaacgcatattagcgatttcgaagcacggcaatcaatat
atgcaattccagcaaccatgggtgaaaatcaagggaaatgacaacgacaagaaaaaagcc
ggaactgttgttgcaatttgctgtaatttagcttgtcttctttccgctcttctggctccc
tttatgcccagtacagccaaacaattgagatctcaactaggtttgaataacaaaagttat
ggctatatccccgaaataataacaaacatgttacctacttggcataaaatcggcaagccc
agtccgttgttcactaagatcgaagatcaaaaagtagaaatgttacgcaagaaatatgct
ggacaacaagagactaatggcgatggaacgaacaaaagttccgacgaaagtatcgcaata
ttagaagccgctatcacaaagcaaggcaacttagtaagagaactgaaagctaaaaacgat
aagagcatttggcaaccgcaggtagaaattttattagatttaaaaaagaagctaaccgat
ctcaaaagtaatgcgaatgcgcctgcgaaaaaatcacctgcgaaaaataagaaggccgaa
ccgatgcacgtgcccgaacaaaatgggaatgctctaacagacgtggcggcattagaatca
gctatcgcgaaacagggtaatctcgtacgagaattgaagaccaaggaagatggaagtgtg
tggaaaccacaagtggaaatattattgaaattaaaacagcgtttgtcagatcttactgga
acaacaccagtcgttgttgacaagaaatctaagaaaaaaaaataa
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