KEGG   Trachymyrmex septentrionalis: 108747777
Entry
108747777         CDS       T11226                                 
Name
(RefSeq) protein CLP1 homolog
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
tsep  Trachymyrmex septentrionalis
Pathway
tsep03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tsep00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108747777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsep03019]
    108747777
Enzymes [BR:tsep01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     108747777
Messenger RNA biogenesis [BR:tsep03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     108747777
SSDB
Motif
Pfam: CLP1_P Clp1 CLP1_N CbiA MMR_HSR1 ATP_bind_1 nSTAND3 AAA_18 AAA_16 TniB AAA_22 CTV_P13 AAA_29
Other DBs
NCBI-GeneID: 108747777
NCBI-ProteinID: XP_018341045
UniProt: A0A195FIC7
LinkDB
Position
Unknown
AA seq 422 aa
MADEKSVVQEFKLDPDCELRFELESKNEKVTLELKNGLAEVFGTELVKGKKYEFSAGAKV
AVFTWQGCTIELVGKTDVSYVAKETPMGLYLNCHAAMERMREMAEKDDTRGPITMIVGPC
DVGKSTLCRILLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNIVEGFSQQAP
LVFHFGHKSPQTNVTLYNLLVTRLAEVCSDRLQANKKAKASGIVINTCGWIKGEGYKLLT
HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQAQRSEARDQGVRE
YFYGSRTPLYPHSFEVKWNEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPSLLH
HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVERQTFTVLSPQPRPLPNTVLLLSDIQFMD
SH
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggccgacgaaaagtctgtggtgcaagaatttaaattagatccagattgcgaattgagg
tttgaacttgagagcaaaaatgaaaaagttacattggagttaaagaatggcttggcagaa
gtttttgggacagaattggtaaaagggaaaaagtatgagtttagtgctggtgcaaaagtt
gcagtctttacttggcagggctgtactattgaattagttgggaaaacagacgtcagctat
gtagcaaaggagactcctatgggtctgtatttaaattgtcatgcagcaatggagcgaatg
agagagatggcagagaaggatgacactagagggccaataacaatgatagtaggaccttgc
gatgtaggaaagtctacgctttgtagaatattattgaactacgctgttagaatgggcaga
agaccaatttttgttgatcttgatgttggtcagggacatatagcgattcctgggactgtg
ggtgctttgttggtagaacgaccatccaatatagtggaaggttttagccagcaagctcca
ctggtcttccattttgggcacaaatcgccacaaaccaatgtaacactatacaacttactt
gtaacacgtttagcagaggtctgctcggatagattacaagccaacaaaaaagccaaagca
tcggggattgttataaatacatgcggctggatcaaaggagagggttataaattgctcact
cacgctgcacaagcatttgaagtggatgcgattcttgtattggatcaagagagactctac
aatgaattggtgagagacatgccagactttgtgaaggtagtctttctgccaaagagtggc
ggagttgttgagagaagccaggcgcaaagaagtgaagcaagagatcagggtgttagagaa
tatttttatggttcacggacaccactgtatccacatagtttcgaggtaaagtggaacgaa
gcgagattgtacaaaatcggagcacctgttctaccagcatcctgcatgccattgggcatg
aaggcagaggataatctgacaaaactggtggctgttacaccgggacccagtttgctgcat
catttgctgtctgtttcttttgccgattctcctgaggatgacgtcgtacagactaatgta
gcaggattcgtttgtgtgactaatgtggacgttgagaggcaaacatttacagtacttagc
ccgcaacctagaccattaccaaatacagtgctgttattgtcggatatacaatttatggac
agtcattag

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