Trachymyrmex septentrionalis: 108747777 Help Entry 108747777         CDS       T11226                                  Name (RefSeq) protein CLP1 homolog   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism tsep  Trachymyrmex septentrionalis Pathway tsep03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:tsep00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     108747777  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tsep03019]     108747777 Enzymes [BR:tsep01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      108747777 Messenger RNA biogenesis [BR:tsep03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      108747777 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CLP1_P Clp1 CLP1_N CbiA MMR_HSR1 ATP_bind_1 nSTAND3 AAA_18 AAA_16 TniB AAA_22 CTV_P13 AAA_29 Motif Other DBs NCBI-GeneID:  108747777 NCBI-ProteinID:  XP_018341045 UniProt:  A0A195FIC7 LinkDB All DBs Position Unknown AA seq 422 aa AA seqDB search MADEKSVVQEFKLDPDCELRFELESKNEKVTLELKNGLAEVFGTELVKGKKYEFSAGAKV AVFTWQGCTIELVGKTDVSYVAKETPMGLYLNCHAAMERMREMAEKDDTRGPITMIVGPC DVGKSTLCRILLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNIVEGFSQQAP LVFHFGHKSPQTNVTLYNLLVTRLAEVCSDRLQANKKAKASGIVINTCGWIKGEGYKLLT HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQAQRSEARDQGVRE YFYGSRTPLYPHSFEVKWNEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPSLLH HLLSVSFADSPEDDVVQTNVAGFVCVTNVDVERQTFTVLSPQPRPLPNTVLLLSDIQFMD SH NT seq 1269 nt NT seq  +upstreamnt  +downstreamnt atggccgacgaaaagtctgtggtgcaagaatttaaattagatccagattgcgaattgagg tttgaacttgagagcaaaaatgaaaaagttacattggagttaaagaatggcttggcagaa gtttttgggacagaattggtaaaagggaaaaagtatgagtttagtgctggtgcaaaagtt gcagtctttacttggcagggctgtactattgaattagttgggaaaacagacgtcagctat gtagcaaaggagactcctatgggtctgtatttaaattgtcatgcagcaatggagcgaatg agagagatggcagagaaggatgacactagagggccaataacaatgatagtaggaccttgc gatgtaggaaagtctacgctttgtagaatattattgaactacgctgttagaatgggcaga agaccaatttttgttgatcttgatgttggtcagggacatatagcgattcctgggactgtg ggtgctttgttggtagaacgaccatccaatatagtggaaggttttagccagcaagctcca ctggtcttccattttgggcacaaatcgccacaaaccaatgtaacactatacaacttactt gtaacacgtttagcagaggtctgctcggatagattacaagccaacaaaaaagccaaagca tcggggattgttataaatacatgcggctggatcaaaggagagggttataaattgctcact cacgctgcacaagcatttgaagtggatgcgattcttgtattggatcaagagagactctac aatgaattggtgagagacatgccagactttgtgaaggtagtctttctgccaaagagtggc ggagttgttgagagaagccaggcgcaaagaagtgaagcaagagatcagggtgttagagaa tatttttatggttcacggacaccactgtatccacatagtttcgaggtaaagtggaacgaa gcgagattgtacaaaatcggagcacctgttctaccagcatcctgcatgccattgggcatg aaggcagaggataatctgacaaaactggtggctgttacaccgggacccagtttgctgcat catttgctgtctgtttcttttgccgattctcctgaggatgacgtcgtacagactaatgta gcaggattcgtttgtgtgactaatgtggacgttgagaggcaaacatttacagtacttagc ccgcaacctagaccattaccaaatacagtgctgttattgtcggatatacaatttatggac agtcattag

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