Trachymyrmex septentrionalis: 108750726
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Entry
108750726 CDS
T11226
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tsep Trachymyrmex septentrionalis
Pathway
tsep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108750726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsep03019
]
108750726
Messenger RNA biogenesis [BR:
tsep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108750726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_14
TPR_19
TPR_2
TPR_1
TPR_CcmH_CycH
TPR_8
TPR_17
TPR_12
TPR_11
TPR_6
TPR_9
ANAPC3
ARM_TT21_C
TPR_7
DUF7017
BTAD
PknG_TPR
Alkyl_sulf_dimr
TPR_20
TPR_21
DUF6584
HrpB1_HrpK
TPR_15
NitrOD1
Motif
Other DBs
NCBI-GeneID:
108750726
NCBI-ProteinID:
XP_018345915
UniProt:
A0A195F9Y1
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MSDDIKILLKEARESFKQNEYLEVMKKCKKVLKKDKTNYAALVLLARSMQEVEEFKSQVS
LVLYKAVEVQPNNPLAWQGLAAYYEKAPQDHDNWEKLALAYCKLLQLDSESPKFTHFVNK
ISEIVLRIKNDDILFEALNVLSALREISTKEKINLIDKTLVWILSEYPNRINKYQELYEN
VLESVIKDIDLVNRQQYYKKYLKILHDSNKLRKLLTAAQDMHTQFPQDAYPLEWLCRIYY
ETEALCETKLEIDITQFYESLLKINANSEAAFIAKAVCLKRTDELIDSCDCLKQVISLNA
QSFYAWLMLSQIYSKLYCWEETENASRQALWLIKSSLKDKFQHGIKLRLLEAISRSSNKQ
KLIEARQMCEELLSVEPSIQLQVIHARTNILLDEPDATVILSNLESQDETKLQAFTLKAL
HLQKHKQYEDAINALELALENSEAWLLFGKIYWDMGDYNHSLMAFLNGVKTDRNNWECMV
YLGHYYREHGNDIERSRRCYHAALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQRVTMQ
GTGPRWAWLQLGLHYLDQGDAGQAITALQHVIRADPNDNHCWESLADAYLVRGAHASALK
SYQRALQLSPESLYPMIQLANIKLLIGQHKEAKEDFESILQNDKQHILALKGLAQACLGL
ARQNIEKQFLCRARENLQQAADNLIDAIIIRSDLLCNWKLLGDVCYRIIILPEKYCYLRI
KSVLMKCDNIEKYVNIKGDEILMLSIRCFCRALSMQNSALLWHDLTCCYMMQLNRASTIN
KNDVAAKCYATAKHAVKLCPQSWLHWNILGVICMSIYVKNYALAQHCFIMAIDRESNNAI
AWSNLGALYLHLGDIYKANEAFSRSQRADPSYVNSWVGQGLIAEKTLRKEAMDLFRHSTQ
LGYHNQAALGYAHWVLTTLLNSTMKEDPLLVYVIENMHAIPAAADILTWYTEREPYDVYA
LNTHGLLLERLRLYNTAAKQFSTALKLSEDEERNMISINLARILIQIGKHEKAVALCKQV
KCANFNSQCHLALSLFKAKQYEDSYNTYEATLHWLADTGADKANVLCAMAAIAYIFQGAD
AVKTLLFQCIQIEPPTVTSLLATAALGILHDDVNLTSLVLNELKSYENHHKYGYHVVTLS
AYYQVVQGNLIQAIRILTKAIFKHPNDVRYWMRLVRVLLLDKNLDVFHKCALTALTLSRN
TTNADIVHVACASAYSHFGTKKGLRQAQKNIFTYPSNIESWANFVAALLSRSKDKDCTPI
NSQWILSLISIIKSQFYASENMSQWLLCNEKELSHLQVNKASQFK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacataaagattttattgaaggaagcccgtgagtctttcaagcaaaatgaa
tatctggaagttatgaagaaatgcaaaaaagttttaaaaaaagacaaaaccaattatgcg
gcattagtactcttagcccgttccatgcaagaggtggaggaatttaaatcacaagtatcc
ttagtcctttacaaggctgtggaggtacaacccaataatccattagcctggcaaggttta
gcagcatactatgaaaaagctccacaggaccatgataattgggaaaagttagctttagct
tattgcaaattgttgcagttagatagcgaatctcctaaattcacacattttgtgaataaa
atttcggagattgtcttgcgtatcaagaatgatgacatattgttcgaagcactgaacgta
ttgagcgcattacgagaaatttctactaaagagaagataaatctgattgataagactcta
gtgtggattttatcagagtatcctaatagaataaacaagtatcaggagctttacgaaaat
gtgttagagtctgtaataaaagacatagatcttgtgaatagacaacagtattacaaaaaa
tatttaaagatactacatgattcaaataaacttagaaagttgctaacagctgctcaagac
atgcatactcaatttccacaggatgcttatcctttagaatggttatgccgtatttattat
gaaacggaggcattatgtgaaactaaacttgaaattgatataactcagttttatgaatca
cttttaaagataaatgcaaattcggaggctgcattcattgcaaaggcagtatgtttgaaa
agaacagatgaattaattgactcatgcgattgtttgaagcaagttatctcattgaatgca
caatcattttatgcttggttaatgttgagtcaaatatattccaaactatactgctgggaa
gaaaccgagaatgcatctagacaagcactatggttaataaaatctagtttaaaggacaaa
tttcaacatggaatcaaattgagattacttgaagcaataagtagaagtagtaacaaacaa
aaattgatagaagcacgtcagatgtgcgaagaattgttaagtgttgagccttccatacaa
ttacaagtaattcatgcacgcacaaatatattattggatgaacctgatgctactgttata
ttaagtaacttggagtctcaggatgaaactaaacttcaagcttttactcttaaagcgttg
catttacaaaagcacaaacaatacgaagacgctattaacgctctcgagctagctttagaa
aattctgaagcttggttgctgtttggtaaaatatattgggatatgggagattataaccac
agtctgatggcatttttaaatggcgtcaaaacagatcgcaataattgggaatgtatggtt
tacttaggacattattatcgcgaacatggtaacgacatagagcgatcaagaagatgttat
catgctgcattacaaatcaatccgaattccgaggaagctggtatcggattaagtacagct
tatcgtcttctcaagaacactgatgccaatatacaattattacaaagggtaactatgcaa
ggtactgggccaagatgggcttggctccaattaggcttgcattacttggatcaaggtgat
gcgggacaagctatcacagcattacagcacgtgatcagagctgatcctaatgacaatcat
tgttgggaatctctggcagatgcatatttggtacgcggcgctcatgcatcggcactaaag
tcgtatcaacgagcactacagctgagcccagaatctttgtatcctatgatacaactcgcg
aatattaaactgctcattggtcaacataaagaagccaaagaagatttcgagagtatatta
cagaacgataaacagcatattcttgcattaaaaggtctagcacaggcgtgtttaggttta
gcaaggcaaaatatcgagaaacaatttttatgtcgggcaagggaaaatctacaacaagca
gcggataatttgatagacgctattataatacgcagtgatctactttgcaattggaaattg
cttggcgacgtgtgttatagaataatcattctgccagaaaaatattgctatttaaggatt
aaatctgttttaatgaagtgtgacaatattgaaaaatatgtgaatattaaaggagacgag
atattgatgttatcaataagatgtttttgtcgggcactatccatgcaaaattctgcattg
ttatggcatgatttaacgtgctgttatatgatgcaactaaatcgtgcttctacaatcaat
aagaatgatgtggcggctaagtgctatgcaactgcaaaacatgccgttaaactctgcccg
caatcgtggctacattggaatattcttggtgttatttgtatgtcgatatatgtaaaaaat
tatgccttggctcaacattgtttcatcatggcgatcgatagagaatcgaataatgcaata
gcttggagtaatctgggagcattatacttacatctaggagatatctacaaagcaaatgaa
gcgttttctcgatcacaacgtgcggatcctagttatgtgaacagttgggtcggacaggga
ttaatcgcggagaagactctgagaaaagaagcgatggatctgtttcgacattcgacacaa
ttgggttatcataatcaagcagctttaggctatgctcactgggtacttactactctcctg
aattccacaatgaaggaagatccactattagtttatgttatcgaaaacatgcatgcgata
cctgcagcagccgacattcttacttggtacacagaacgcgagccatacgatgtttatgct
ctaaatacacatggtttattattggaacgactaagattgtacaatacggcggctaaacaa
ttttctacagctttaaaactgagtgaagatgaagaaaggaatatgatatccataaactta
gcacgcatcctgattcaaatcggaaaacacgaaaaagcggtagcattatgtaaacaagtg
aaatgtgcaaatttcaattctcagtgtcatctagcattatctttgttcaaagccaaacaa
tatgaagattcgtacaacacatatgaagcaactttacattggctagcagacactggtgcg
gataaagctaatgtcttgtgtgcgatggctgcgattgcttacatatttcaaggagcagat
gctgttaaaactttactatttcaatgtatacaaatagaaccgcctactgtaactagtctc
ttagcgactgctgcattaggaattttgcatgacgatgtaaatttgacttctttggtattg
aacgaattgaaatcatacgaaaatcatcacaagtatggttatcatgttgtcacactgtca
gcatattatcaagttgttcagggaaatctcatccaagctattcgaatacttactaaagct
attttcaaacaccctaacgacgttagatattggatgcgtcttgttcgagttttactattg
gacaaaaatttggatgtctttcataaatgtgctctaacggcgttgacactaagcagaaat
acgaccaatgctgatattgtacatgttgcttgcgcatcggcatacagtcactttggtaca
aaaaagggtctcagacaagctcagaaaaatatatttacatatcccagtaacattgagagc
tgggctaatttcgttgcagctcttttatccagaagtaaggataaggactgtactccgatt
aatagtcagtggatactgtcactaatatcaataataaaatcacaattttacgcttctgaa
aatatgtcacaatggttactttgcaatgagaaagaactaagtcatctccaagttaacaag
gcctcgcagtttaaataa
DBGET
integrated database retrieval system
