Thermoanaerobacterium saccharolyticum: Tsac_1003
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Entry
Tsac_1003 CDS
T02137
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
tsh
Thermoanaerobacterium saccharolyticum
Pathway
tsh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tsac_1003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsh03021
]
Tsac_1003
03400 DNA repair and recombination proteins [BR:
tsh03400
]
Tsac_1003
Enzymes [BR:
tsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tsac_1003
Transcription machinery [BR:
tsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tsac_1003
DNA repair and recombination proteins [BR:
tsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tsac_1003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AFK86019
UniProt:
I3VU24
LinkDB
All DBs
Position
1047660..1051373
Genome browser
AA seq
1237 aa
AA seq
DB search
MLHPVDAGYKKRMSFARIEEVLDMPNLIEVQKNSYKWFLDEGLREVFRDISPIESFTGNL
SLEFLDYKLDDNPKYSVEECKDRDTTYAAPMKVKVRLTNRDTGEIKESEVFMGDFPLMTD
KGTFIINGAERVIVSQLVRSPGVYYEQQFDKLGKKLFFATVIPNRGAWLEYEEDSNDIFS
VRIDRTRKVPITVFLRALGYGTDAQILDLFGEDERIKATLDKDTTKSEEEGLLEVYKRLR
PGEPPTVESAKSLLYSLFFDPKRYDLAHVGRYKFNKKLALSSRLTNQKAAAKIVNPLTGE
IIVEEGQRISREIAKKIQDCGINEVEVLVEGRPVKIIGNNTVDINEYPLSFDVSDLKIKE
KVHLTVLKEILDNFSSEDDIKNEIRRRLDELIPKHITKDDIIASVNYNLNLSYGIGFVDD
IDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVSEITAQNLINIRPVVAAIKE
FFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGMEVRDVHHTHYSRMCPIETP
EGPNIGLIGSLATYARINEYGFIEAPYRKVDKSTGKVLNEIVYMTADVEDEYVIAQADEP
LDEENRFVNERVTVRSKDDILSVPREEVDFMDVSPKQVVSVATAMIPFLENDDANRALMG
SNMQRQAVPLLVPQAPIVGTGIEYKAARDSGVVNIARNSGIVERVTADKIVIKTDDGRRD
EYELLKFKRSNQGTCINCRPIVNEGDRVEKGQVISDGPSTELGEIALGRNVLVGFMPWEG
YNYEDAILISEELVKEDALTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALKDLDERG
IIRIGAEVTAGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLRVPHGEGGIVV
DVKVYTRENGDELPPGVNEMVRVFIAQKRKISVGDKMAGRHGNKGVVSRILPVEDMPFLP
DGTPLQICLNPLGVPSRMNIGQVLEVHLGLAAKALGWYMATPVFDGAHEEDIQELLEKAG
FSPDGKIQLYDGRTGEPFDHPVTVGYMYMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKA
QFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDIAGRVKTYESIVKGENIPEPGVPESF
KVLVKELQSLCLDVKVLTEDNQEVALKEFEDEDDDDISEDTININIEGREDAPPEVNYGE
EFNEDFDEDKDAFDDLNFEPTDIDFGDSDSFDDDYDL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgttacatcctgttgatgccggctacaagaagcgcatgagctttgcaaggattgaagaa
gtcttggatatgcctaatttgattgaagtccaaaaaaattcatataagtggtttttggac
gaaggcttgagggaggttttccgagacatatctccgattgaaagttttaccggcaatttg
tctttagaatttttagactacaagcttgatgacaatcctaaatactctgtagaggaatgt
aaagatagggacactacttatgcggcgccaatgaaagtaaaggtaagattgactaatcgc
gatactggtgaaataaaggaatcagaagtttttatgggcgattttcctttgatgacagac
aaaggtacttttataataaatggcgcggaacgcgttattgtcagccagttggtaagatcg
ccaggcgtatactacgaacaacagtttgacaaattagggaagaagctgtttttcgcgact
gtcataccgaatagaggtgcatggctggagtacgaagaagattcaaatgatattttttct
gttagaatagataggacgagaaaagttccaatcactgtttttcttagagctttaggttat
gggacggatgcgcagatattggatctttttggggaagatgaaagaataaaggctactctt
gataaggacaccacaaaatctgaagaagagggtttgcttgaggtatataaaagattgaga
cctggtgaaccgcctactgttgaaagcgctaaaagtttgctgtactctttattctttgat
ccaaaaagatacgatcttgcgcatgttggtcgctataagtttaataaaaagcttgcatta
agttcgagattgacgaatcaaaaagccgctgcaaaaattgtcaatccactgacaggcgaa
atcatcgttgaggaaggtcaaagaatatcaagggagattgctaaaaaaatccaggattgt
ggcataaatgaggttgaagtgcttgttgaaggaagaccagttaagataattggcaataat
actgttgatattaatgaatatccgctttcctttgatgtgtcagatcttaagataaaagag
aaagtgcatttgactgttttgaaagagattctggataatttttcaagcgaagatgacata
aaaaatgagataagaagaagactggatgaattaatacctaaacatatcactaaagatgat
attattgcttctgtaaattacaatttaaatctttcatatggtattgggtttgttgatgat
attgatcaccttgggaatagaaggctcagatcagttggcgaattgcttcaaaatcagttt
agaataggtctatcaaggatggaaagagtagttagagaaagaatgactatacaagatgtc
agtgaaattactgctcaaaacctgataaatattaggcctgttgttgctgcaattaaagag
ttttttggaagttcacagctttcgcagtttatggatcagacaaacccccttgcagagctt
actcacaagagaagattaagcgcattaggcccaggagggctaagcagagaaagagccgga
atggaagtcagggatgtccatcatacacattacagcagaatgtgtcctatagagacgcct
gaaggaccaaatataggacttataggttctcttgctacatatgcaaggattaacgagtat
gggtttattgaagctccttacagaaaagtcgataaatcgacaggtaaggtcctcaatgag
attgtgtatatgactgcagatgtggaagatgagtatgtgatcgctcaagcagacgaacct
cttgatgaagagaatagatttgtaaatgagagggttacagttcgctcgaaagatgatatt
ttgtcagtgcccagagaagaagtagattttatggatgtttctccgaagcaggtagtttct
gtagctaccgcaatgattcctttcctggaaaatgatgatgcaaacagggctctgatgggt
tcaaacatgcagaggcaggctgttccactccttgttccacaggcgcctatcgttgggact
ggcattgagtataaggctgccagggattcaggcgttgtaaatatcgccagaaacagtggc
atagtagagagagttacggcagacaaaatagtaataaagacagatgatggaagacgtgac
gagtatgaacttcttaaatttaagagatcaaaccaagggacttgcataaattgtagacca
atagtaaatgaaggggatcgcgttgaaaaaggacaggttataagcgatggaccttctaca
gaattgggtgaaattgcacttggacgcaatgtattggttggatttatgccttgggaaggt
tacaattacgaggatgctattttgattagcgaagaacttgtaaaagaggatgctcttaca
tctatccatattgaggaatacgagtcagaagcaagagacacaaaattaggaccggaagag
ataacgagagatattcctaatgttggtgaagaagcattaaaggatttagacgagagagga
atcatacgcattggtgcagaagttacggctggagacattctcgtcggcaaagtaactcca
aaaggcgaaacagagcttactgcagaagaaagattgttaagagccatattcggagagaaa
gcgagagaagttagagatacttctttaagagttcctcatggtgaaggcggcatagttgta
gatgttaaagtgtacacgagagaaaatggcgatgaactgcctccaggagtaaatgaaatg
gtgagagtttttatcgcacagaagagaaagatatctgttggcgataagatggcaggtagg
catggaaataagggtgtcgtttcaaggatacttcctgttgaggatatgccgtttttacct
gatggtacaccgcttcagatttgcctgaaccctcttggtgttccttctcgtatgaatatc
ggtcaggttttggaagtccacttaggacttgcagcaaaagctttgggttggtatatggct
acgccggtatttgatggtgcccatgaggaagatatacaagagctgcttgaaaaggcagga
ttttcgccggatggaaaaatacagctttacgatggaagaacaggcgaaccttttgaccat
ccagttactgttggatatatgtacatgcttaagctgcatcaccttgtcgatgataaaatg
catgcaagatctacaggaccatattctcttgtcacacagcagccacttggtggtaaagca
cagtttggtggtcagagattcggtgagatggaagtatgggcgcttgaagcatatggagct
gcccacacattgcaggaaatacttacagttaaatctgatgatatagcaggacgtgtgaag
acatacgaatcgatagtcaagggtgaaaatataccagagcctggtgtaccagagtcattt
aaggttcttgttaaagaattgcaaagcctttgccttgatgtaaaagtattgactgaggat
aatcaagaagtagcactgaaagaatttgaagatgaagatgatgatgatatctcagaagat
acgataaacattaatattgaaggcagggaagatgcgccgccagaggtaaattatggcgaa
gaatttaacgaagattttgatgaagataaagatgcatttgacgatcttaactttgaaccg
accgatatagactttggcgatagtgacagctttgatgacgattatgatctataa
DBGET
integrated database retrieval system
