Thermoanaerobacterium saccharolyticum: Tsac_1961
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Entry
Tsac_1961 CDS
T02137
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigK
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
tsh
Thermoanaerobacterium saccharolyticum
Brite
KEGG Orthology (KO) [BR:
tsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsh03021
]
Tsac_1961
Transcription machinery [BR:
tsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tsac_1961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_23
HTH_31
MarR_2
HTH_19
HTH_28
HTH_24
HTH_Crp_2
HTH_29
HTH_38
KORA
MarR
Phage_CII
HTH_10
Trp_repressor
HTH_37
Sigma70_ECF
TrmB
HTH_5
Sigma70_r4_2
Syntaxin_2
Motif
Other DBs
NCBI-ProteinID:
AFK86965
UniProt:
I3VWS0
LinkDB
All DBs
Position
complement(2009092..2009787)
Genome browser
AA seq
231 aa
AA seq
DB search
MWAALIALVTSIVKDIINFGYLTNANSFPQPLTAEEEKKYFEAFKNGDEEAKNILIERNL
RLVAHVVKKYSNTGKDVDDLISIGTIGLIKAILTYDSSKGTHLATYAARCIENEILMSLR
AEKKIKSEISLHDPIGVDKEGNEISLIDILGTETDEVSDQVELRMQVKKLYHKLNSVLKN
REKLIIELRYGLLNGGAKTQREIAKMLGISRSYVSRIEKKALNKLFKEMTM
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcagcgcttatagcgcttgttacatcaatcgtgaaagacataataaatttcggc
tatttaacaaatgctaattcatttccccaacctctcacagcagaagaagaaaaaaagtat
tttgaagcctttaaaaacggtgatgaagaagcgaaaaatattttgatagaaagaaattta
aggcttgtagctcatgttgtaaagaagtacagcaatacgggcaaagatgtagatgattta
atatccataggtacaataggtcttattaaggcgattttaacctacgattcctcaaaagga
actcatttagccacatatgctgctcgatgcattgaaaacgaaatattgatgtcattgcga
gcagaaaagaagataaaatctgaaatatctctacatgatcctataggagttgataaagaa
ggcaatgagatctcgctaatagatattttagggactgagacagatgaggtaagtgatcaa
gtagaattaagaatgcaagtaaaaaaactgtaccacaagttaaatagtgtccttaaaaac
agggaaaaattaataattgaattaagatatggcctcttaaatggcggtgcaaaaactcaa
cgagaaatagcaaaaatgttaggaatttcaagatcttatgtgtcgaggatagaaaaaaag
gcattaaacaaattatttaaggaaatgacgatgtaa
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