Trichinella spiralis: Tsp_03643
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Entry
Tsp_03643 CDS
T01609
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
tsp
Trichinella spiralis
Pathway
tsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tsp_03643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_03643
Membrane trafficking [BR:
tsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
Tsp_03643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
10910366
NCBI-ProteinID:
XP_003379993
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MSWADYIRSQEENDGVRFTWNVWPTSRIEAQRMVVPVACHYTPFKERSNETLRPPPLNYD
PVLCTRPSCKAILNPYVQVDFRAKAWICPFCFQRNPFPPHYARIAEDNVPPELIPHFTTV
EYTLTRAPCLPPIFLFLLDTCVNADELKALKASIMTALSLLPPEAIVGLVTFDRMVQVHE
LNAQGMSRAYVFKGDKVVSQKQLQDVLVANIGRQPLMAVGQLPKQPQSVGGKAQAVPTNK
FLQPIHQCHMAITELLEEIEQNPWNVVPTHRPLRCTGAALSVAVTLLEVCYANTGGRILT
FIGGACTYGPGIIVGDELRVPIRSWHDIKEDAVKYMKKATKYYEELASRAVTNGHAIDIY
SCALDQTGLHEMKSLTNLTGGHMIMADSFDSTLFKQSFQRVFEKDQVGMLKMGFNATLEI
KTSNEMKLEGALGCCANLNIKNQSVSENELGMGGTCQWKFCSLTPHSTTTFFLEIVGQQG
APVPQGGRGYVQFITQFQHPSGQRKIRVTTTCRNWIDASEQSQHISIGFDQEAAAVAMAR
LAIWRASNENDTPDALRWLDRSLIRLCQRFGDFLKDDPNSFRLQDQFTMYPQFMFHLRRS
QFLQVFNSSPDESAYYRHVLMTESVMECITMIQPVLFAYSFNGPPEPVLLDTASILPDRI
LLMDDFFHVLIYHGAVGDTIAQWRKLGYQNDPQYEAFKHLLEAPIEDARTILRDRFPMSR
YIETEHEGSQARFLLSKVNPSLTHNNPWGADGAPVFTDDVSLQIFMEHLRKLSVSTGKTV
GVQFDQYFNIRFNNQNFFFLPLHSPIRRILLIRESDLRIFLDHRSQHRAGHGKVDYDNKK
NNSQCREIIRHPPKVVVLLTTRTEKYEQNCIRLKSSGTSSIGGMSTENLLPVSCSFVIIF
VNNDDDDAFIDRCTVAVRALTGGFESSPQYNASTDNRLLVTLLSDLINQLRY
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgggcagattatattcgttcccaggaagaaaatgatggagttcgatttacgtgg
aacgtatggcctacaagtcgcattgaagctcaacggatggtagtgccagtagcttgtcat
tacacaccatttaaagaacgttctaatgaaacactaagaccaccacctctaaattatgat
cctgtactgtgcacgcgtccatcctgtaaagcgattttaaatccatatgtacaagttgat
tttcgggcaaaggcatggatctgtccgttttgtttccagagaaatccgttccctccacat
tatgctcgaattgccgaagataacgttccaccagaacttataccccactttaccaccgtt
gagtatacattgacacgtgctccatgcttacctccaatatttttgtttcttctcgacact
tgcgtaaacgcagacgaattgaaagctttaaaagcttcaattatgaccgcgttaagtctt
cttcctcctgaagctattgtcgggttggtcacttttgataggatggttcaagttcacgaa
ctgaacgcacaaggtatgtctcgtgcgtacgtctttaagggagacaaagttgtttctcaa
aagcagttgcaggatgttttggttgcaaatattggtcgacaacctctgatggcagttgga
caattaccgaagcaacctcagtcagttggtggaaaagctcaagcagtaccaaccaataag
tttttgcagccgatccatcagtgtcatatggccattacagaactgcttgaggaaattgag
caaaatccttggaatgtagttcctacacatcgtcctttaaggtgcactggtgccgctttg
tctgtagctgtaacgcttttggaagtgtgttatgcaaatactggtggtagaattttgaca
tttatcggtggagcctgcacctacggccctggcataattgttggcgatgaactgagagta
cccattcggtcatggcatgatatcaaagaggatgctgtgaaatatatgaagaaagctaca
aaatattatgaagaattggcatctcgtgctgtgacgaatgggcatgctattgatatatac
tcttgtgctttagatcagacaggtttgcacgagatgaaaagtttgacaaatttaactgga
ggtcatatgataatggcggactcgtttgactccactttgttcaagcaatcatttcaacgt
gtttttgaaaaagatcaagttggcatgttgaagatgggttttaatgcaactttagaaatt
aaaacatcgaatgaaatgaaactggaaggcgctttaggttgttgcgcaaatttgaatatt
aaaaatcaatccgtgagcgaaaatgaacttggcatgggtggcacatgtcagtggaagttt
tgctcattgactccgcattccaccacaactttttttcttgaaattgtcggccaacaaggc
gcgcctgtaccacagggaggtcgtggatatgtgcagtttattacccaatttcagcatcca
agtggtcaacgtaaaattcgcgtcacgactacttgtcgcaattggatagatgcaagtgaa
caatcgcagcacatttctatcggattcgatcaagaagcggcggctgtagcaatggctaga
ctagcaatttggcgggctagtaatgagaatgatacaccggatgctttgcgttggttggat
cgaagcttaattcgtctttgtcaacgtttcggtgatttcctcaaagatgatcctaattca
tttcgacttcaagatcagtttacaatgtatccacagtttatgttccatttgcgtcgatca
cagtttttgcaagttttcaacagcagccccgatgaatccgcatattacaggcacgtgctg
atgacagaaagtgtgatggagtgcataacaatgattcagccagttctatttgcatattca
ttcaatggaccgcctgagcctgttcttctggatacggcaagcattcttcctgatcgtatt
ttgcttatggacgactttttccacgtgttaatttatcacggagcggtgggcgatacaatt
gctcagtggcgcaaattgggctatcagaacgatccacagtacgaagctttcaagcatcta
ttggaagcgccgatcgaagatgccagaacaatattgcgcgaccgttttcccatgtcaaga
tacattgaaacagaacacgaaggttctcaagctagattcttgttatcgaaagtgaatcca
tctttgactcacaataatccttggggagcggatggggcgccagttttcaccgatgatgta
tcattgcaaattttcatggaacatctgaggaagttgagcgtatctacaggaaaaacagtt
ggtgttcagtttgatcagtattttaacatccgtttcaataatcaaaacttcttttttctg
ccattacattctcccattcgtcgtattcttctaattcgcgaaagcgatctccgtattttt
ttggaccatagatcgcaacatcgggccggacatggcaaagttgactatgataataagaag
aataattcccagtgccgtgaaataatacggcatccaccaaaagtggtcgtacttctgaca
acaagaacagaaaaatacgaacaaaattgcatacgtctgaaatcatccggaacgagttct
ataggtggcatgagcactgaaaacttactgcccgtatcttgcagtttcgtaattattttt
gtaaataatgatgacgatgatgcatttattgatagatgtacagtagcagtacgcgcgctt
actggtggttttgaaagctcgcctcagtacaacgcttcaactgataatcgattgcttgtc
acattgttgtcagatttgatcaatcaattgcgttattaa
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