KEGG   Trichinella spiralis: Tsp_05477
Entry
Tsp_05477         CDS       T01609                                 
Name
(RefSeq) polyadenylate-binding protein 2
  KO
K14396  polyadenylate-binding protein 2
Organism
tsp  Trichinella spiralis
Pathway
tsp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Tsp_05477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_05477
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Tsp_05477
SSDB
Motif
Pfam: RRM_1 RRM_occluded GT-D
Other DBs
NCBI-GeneID: 10913288
NCBI-ProteinID: XP_003371823
LinkDB
Position
Unknown
AA seq 208 aa
MATTTTATAAEIEEIRARLKEMEKEAQLIRNLHTEVEKQMSTVLNESPTPPPLTSDEKVE
ADSRSVFVGNVDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKGFAYIEFADKESARA
SLAMTDTLFRGRQIKVVEKRTNRPGMGFNRRRMRGRVAYRYLYSNRRLRYRLFIFLYKDF
NSNYSFQTRSQLFTVLNNVPLDTNCNID
NT seq 627 nt   +upstreamnt  +downstreamnt
atggccacaacaacaacagcaacagcagcagaaattgaagagattcgtgctagattgaaa
gaaatggagaaagaagcacaacttattagaaatttgcatacggaagtggaaaaacaaatg
tcgaccgttttaaatgaatcaccaacaccaccaccacttacttccgatgaaaaagttgaa
gcggattctcgttcagtttttgttggaaatgttgactacggagctgcagctgaagaactg
gaggcacattttcatggctgtggtgctataaatcgcattactattctttgtgatcgttac
agtggtcgtccaaaaggatttgcttacatcgaatttgcggataaagaatctgctcgagcg
tccttggccatgactgacactctttttcgtggtcgtcagattaaggttgtggagaagcgt
acaaatcgtccaggtatgggttttaacagaagacgtatgagaggacgagttgcttatcgc
tatttgtattccaatcgtcgtcttcgttataggttgttcatttttttatataaagacttc
aattcaaattattcatttcagacgaggagccagttattcaccgtattaaataatgtgccg
cttgatacaaattgcaacatcgattga

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