Trichinella spiralis: Tsp_05538
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Entry
Tsp_05538 CDS
T01609
Name
(RefSeq) zinc finger protein
KO
K17846
krueppel-like factor 4
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_05538
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
Tsp_05538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
Zap1_zf1
C2CH-3rd_BIRD-IDD
FOXP-CC
zf-C2H2_16
Motif
Other DBs
NCBI-GeneID:
10913361
NCBI-ProteinID:
XP_003371896
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MPILVATPPRLHSVPIALSHSFTWRPTPAVPNGQHVHVRSTEIAQSNNVVLQSSAQRRSS
FPLLLSLGSLVRSSLVNIFTAIQTPPPKASTIQKEPNLYDSSFCQAMMTNYLVAESCPSL
YSQHLCHFYTALPCYHFTKSSVMWEWEDVESFLNSQINGDETIKREESEKETSSSASLQT
TPVLNRQQFYLGQTSSGQQLQSCHIPNAYGCALISQHADSCWISSNKWCDICKRNVHTSV
ESVHFSDATPYQTQTKHITNFTNRSSFTLPMYQRNMIYTENVFHNQAVGFGNFCGITPPA
SPDQGLNMIFHNSTSPIFHSYNSSSAPLLKLKMASDYSANHATNLFCATPPISPAYQHIV
HIDANINGFLVDRCMEPIFPTYKPTEQQNYVNSTNQINHHSDLDVQKSISSCEMLQTHCC
NNERPVKARAKRCKKNIAHGCTHPGCVKTYTKSSHLKAHMRIHTGEKPYACNWPDCGWKF
ARSDELTRHVRKHTGDRPFHCAICGRAFARSDHLTLHMKRHNIF
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgccaattctagtggcgacacctcctcgacttcattcagttcccatcgcactttcacat
tcattcacctggcgaccaacacccgctgtgccaaatggtcaacacgtgcatgtccggtca
acggaaattgcgcagtcgaacaatgtggttttgcaatcatcagctcagagaaggtcgtct
tttccgttgcttctttcacttgggtcactggttcggtcgtcactcgttaacattttcacg
gccattcaaactccgcctccaaaagcttcaaccattcagaaagaaccaaacttatacgat
agctcattttgtcaagcaatgatgacaaattaccttgtcgcagaaagctgcccaagctta
tactctcagcatttgtgtcatttttacaccgcgttgccttgctatcacttcaccaaatct
tccgttatgtgggaatgggaggacgtggagagttttctcaacagccaaatcaatggtgac
gaaactatcaaaagagaagaatctgaaaaagagacaagcagcagtgcttcattgcaaacg
acaccggtgttgaatcgtcagcaattttacttgggtcaaacaagttctggtcaacaattg
caaagctgtcacattcccaatgcatacggttgtgcgttaatttcccagcatgccgactct
tgttggatcagttcaaacaaatggtgtgacatatgcaagcgaaatgttcacacttctgtc
gaatctgttcatttttccgatgctacaccatatcaaacacagacaaagcatattactaat
tttaccaataggtccagtttcactttaccaatgtaccagcgcaatatgatatatacggaa
aatgtttttcacaatcaagcagtcggttttggaaatttttgtggaatcacaccgcccgct
agtccggatcaaggcttaaacatgatattccacaattcaaccagtccaatcttccattcg
tacaacagttcatcggctccattgctgaaactgaaaatggcgtccgactattctgcaaat
catgcaaccaatttattctgcgcaacaccaccaatctcaccagcttatcagcacattgtt
cacatcgatgccaacattaacggatttcttgtcgacaggtgcatggaaccaatatttcca
acttacaaaccgactgaacaacaaaattacgtcaactcaacaaatcaaatcaaccatcat
tctgatctggatgtgcaaaaatcaatctctagctgtgaaatgttgcaaacacattgttgc
aacaacgaacgccctgttaaagcacgtgccaaacgttgcaaaaaaaatatagctcatggt
tgtacacatccaggatgcgtgaaaacttatactaagtcttcgcatctgaaggcccacatg
agaattcacacaggtgaaaagccgtacgcttgtaactggccagactgtggctggaagttt
gcccgatcagacgaactaactcgacatgtgcgcaaacatacgggagatcgaccatttcac
tgtgccatttgcggaagagcattcgcccgttctgaccacctgacgcttcacatgaaacgg
cataacattttttga
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