Trichinella spiralis: Tsp_07937
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Entry
Tsp_07937 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K14313
nuclear pore complex protein Nup53
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_07937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_07937
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Tsp_07937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
10906493
NCBI-ProteinID:
XP_003373338
UniProt:
E5SL54
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MDRRNIACYAHVLLRSLCSKERLEILKNPQVIVDYNFCLAMHTPKENKNDRSAPSHLPPF
LLGLRTSTPVKEVPTSPTLPNPEPIVEEKPNNSLNGALYGVPCSLNDASFGPPVKSLAEG
MFSSFDVPALKPSMNKSCGISSHASLQPSDESSDSDDGSWRNSTFFRSDASNSGLLYCEN
FNPTIFAQFSSSHGTEMSTSCVTVYGFDKEVAPSILEEFSNCGEVCSYEYSTVGNWMYIL
YKTALQAEIAVSKSGHIFFDNVKVGVEKCTNESVITRLMAKMNKIGSRDIKGGVQAALKP
RSFRSCVGRSFISEAKRPATSISKCSIANVTSRPAKAIRPLADSCNVEDVNFDYEEDANE
GLLRKIYRAFFQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaggaacattgcttgctatgcccatgttctgctgcggtcattatgtagtaag
gaaagattggaaattctcaagaatcctcaggtaattgtggattataatttctgcttggcc
atgcatacgccgaaggaaaataaaaatgaccgttctgctccttcgcatttaccaccattt
ttgttgggactgcgaacttctactccagttaaagaagtgcccacatctccaactctacct
aatcctgaaccgattgttgaagagaaaccaaataactcactgaatggtgctctgtacggt
gttccttgttcattgaacgatgcatcttttggccctccggtgaaatcgttggctgaaggt
atgttttcgtcgttcgacgttccagcgctgaaacccagcatgaataaatcttgtggaatt
tcgtcgcatgcatcgcttcaaccgtccgacgaatcgtccgattctgacgatggttcttgg
cgtaattcaactttcttccgatccgacgcatcaaacagtggtcttttgtattgtgaaaat
tttaatcctaccatttttgcacaattcagtagctcacatggaacagaaatgagcactagt
tgtgtaacggtgtatgggtttgataaggaggtagctccgagtattttggaggagttttcc
aattgtggtgaagtttgctcttacgaatattcaactgttggaaattggatgtacattttg
tacaaaaccgccttacaagcggaaatagcggtgagcaaaagcgggcatatcttttttgat
aatgtcaaagttggagtggaaaagtgcacaaatgaaagtgttattacaaggttgatggca
aaaatgaacaaaattggaagtcgtgatatcaaaggaggagttcaggcagcgttgaagcca
cgctcgtttcgttcttgtgttggtcggtcgttcatttcggaagcgaaacgaccagctacg
agcatcagcaaatgtagcatcgctaacgttacttcacgtcctgcgaaagcaatccgtcca
cttgcagacagttgcaacgtagaagatgtaaattttgattacgaagaagacgccaatgaa
ggtctgctgcgaaaaatttatcgtgcttttttccaataa
DBGET
integrated database retrieval system
