KEGG   Trichinella spiralis: Tsp_08920
Entry
Tsp_08920         CDS       T01609                                 
Name
(RefSeq) AP-1 complex subunit beta-1
  KO
K12392  AP-1 complex subunit beta-1
Organism
tsp  Trichinella spiralis
Pathway
tsp04142  Lysosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    Tsp_08920
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_08920
Membrane trafficking [BR:tsp04131]
 Endosome - Golgi transport
  Others
   AP-1 complex
    Tsp_08920
SSDB
Motif
Pfam: Adaptin_N Cnd1 HEAT_2 HEAT Arm HEAT_GCN1 API5 PDS5 INTS1_R4 RTP1_C1 VPS15-like_hel XMAP215_CLASP_TOG CLASP_N TOR1L1_N UNC45-central HEAT_GCN1_C Ltn1_1st DNA_alkylation
Other DBs
NCBI-GeneID: 10902465
NCBI-ProteinID: XP_003382063
LinkDB
Position
Unknown
AA seq 324 aa
MSDSKYFTTTKKGEIFELKSELNSDRKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKTQPDLAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE
YLCDPLRKCLKDEDPYVRKTAAVCVVKLYDINAELVEDQGFLDQLKELMSDSNPMVVANA
VAALTEINEMSPKPLMEMNSQTVNKLLTALNECTEWGQVFILDSLANYIPKDEREAQSVI
IINRVLMKFLKAIVSDTDFVNMLVKKMAPPLVTLLSAETEIQYVALPNINLIVQKMYLLL
MLFPLTDYENAKGVLSCIHVCLIV
NT seq 975 nt   +upstreamnt  +downstreamnt
atgagtgattcaaagtattttaccaccacaaaaaaaggagaaatatttgaactgaagagc
gagctgaatagtgatagaaaagaaaagaagaaagaagctgtaaaaaaagtaatagccagc
atgactgttggaaaggatgtcagtgcactattccctgatgtagtgaactgcatgcagacg
gataatttggaactgaaaaagctcgtttatctgtatttgatgaactacgctaagacacaa
cccgatttagctattatggcagtgaatacttttgtaaaagattgcgaagatccgaatcca
ttgattcgagcacttgcagttcgaacaatgggatgcattcgagtggataaaattacagaa
tatttgtgtgatcctttgcgcaaatgtttgaaagatgaagatccatatgtacgaaaaacc
gctgcagtttgtgttgtcaaattgtacgacatcaacgctgaacttgtcgaagatcagggt
tttcttgatcaattaaaagagctaatgtccgattccaatccaatggtggtcgctaatgca
gtggcagcgttgactgaaatcaatgaaatgagtccgaaaccgttgatggaaatgaattca
caaacggtgaacaaattactgaccgccttaaatgaatgcacagagtggggccaggtattt
attttggattctttggcaaattatattccaaaagacgaaagagaggctcagagtgtaatt
attataaaccgggtacttatgaaatttttgaaagcaatcgtttccgacactgattttgta
aatatgctggtgaaaaagatggctccaccgcttgtgacacttctatccgccgagactgaa
atacaatacgtcgctttaccgaatattaatttgatcgtacagaagatgtatttgttgttg
atgttgtttcctttaactgattatgaaaatgctaaaggagttctttcatgcattcacgtg
tgcctgatcgtatga

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