Trichinella spiralis: Tsp_09102
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Entry
Tsp_09102 CDS
T01609
Name
(RefSeq) 3'-5' exoribonuclease CSL4-like protein
KO
K19478
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit MAGT1/TUSC3
Organism
tsp
Trichinella spiralis
Pathway
tsp00510
N-Glycan biosynthesis
tsp00513
Various types of N-glycan biosynthesis
tsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
Tsp_09102
00513 Various types of N-glycan biosynthesis
Tsp_09102
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tsp_09102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsp02000
]
Tsp_09102
Transporters [BR:
tsp02000
]
Solute carrier family (SLC)
SLC58: MagT-like magnesium transporter
Tsp_09102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OST3_OST6
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
10902826
NCBI-ProteinID:
XP_003382260
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MYYIFTPHSDVVDLCNNNECFILVSSDSVVFNRFATHQSAENEEGTAKFRGEGYVHARLV
GKKIRASVEQCEIPTVCPLVTSVVQDEFEVVASSYRFTNMNSKRLYFVLADYEEAGELGI
SAIPIILHVPPRGNLKRQDKMDFQRSGIQAEAIAKWVHERTDVVIPVMRPPNYAGPVALF
LLLMLVCGLLYMKRSSLDFLYNRNLWGFLALCITFAFLSGQMWNHIRSPPFFYHNPKTGQ
WNFYNEQFLHVDMAITMGFILLVDATDTKTSSSKTRRKYIRFIYLFSLCLCRNWSGGDRI
QLPPVSVSIEISRLSVPLVVSLKKGSIAAYLLETRRQHLLFLCRCGFCLSQKLYKINSIS
VDDLIEEFSGKFVIPEQEENIRSGYGCYVAHGYYFASLAGQLKLTKENDCAVVEVVRENS
STSILPSPQAVVTCRVTGVANKYAKCTILMVHNNILPYPFVGIIRKENVYGSAKNETEVS
MYECFQEGDIVLAKVFSLGDSFSYLLSTEELELGVFVGYCKEKHKMQPTADKQHLHCEIC
LTKEPRKIADLESDEEILKWKRRHYGKR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtattatattttcacaccacattcagatgttgttgatttgtgtaataacaatgaatgc
ttcatattggttagcagcgacagtgttgtgtttaaccgttttgccactcatcaatccgca
gaaaacgaagaaggaacagctaagtttagaggagaaggttacgttcatgcaagattggtt
ggcaaaaagatccgtgcttcggttgaacaatgcgaaattccaacagtatgtccgctcgtc
acctccgttgtgcaggatgaattcgaagtggtcgcgagttcatatcgttttacgaatatg
aattccaaacgtttgtatttcgttttagcagactatgaagaagccggtgaactcggaatt
agcgcaataccgataattttgcatgtaccaccccgcggcaatttgaaacgacaagacaag
atggattttcaacgcagtggcatacaagccgaagcgattgcgaaatgggtacacgaaaga
actgacgttgtgatcccagtgatgcggccgccgaactatgccggcccggttgctctgttt
ttgctcttgatgttggtttgtggacttttgtacatgaagcgaagcagtttggactttttg
tacaatcgaaatctttggggttttctcgctttgtgcattacttttgctttcttgtcagga
caaatgtggaatcacatcagaagtcctccatttttctatcataatcctaaaactggacag
tggaatttctacaatgaacaatttttacatgtagatatggcaattacaatgggattcatt
ttgctcgtcgacgccaccgacacgaaaacatcatcctctaaaactcgccgtaaatatatt
cgatttatttatttattttctttatgcttatgccggaattggtctggtggtgatcgtatt
cagctgcctcctgtcagtgtttcgattgaaatatcgcggctatccgtaccgcttgttgtt
tccttgaaaaagggatcgatcgcagcgtacttacttgaaacaagaagacagcatcttctc
tttttgtgtcgttgtggcttttgtttgtctcagaaactgtataaaatcaattctatttca
gtagacgatttgattgaagaattcagtggaaaatttgtaattccagaacaggaggagaac
attcgctccggttatggttgttacgtggctcatggctattatttcgcttcattggctgga
caattgaaattgacaaaagagaatgattgcgctgttgttgaagttgtacgtgaaaattcc
tcaacaagtattttaccgtcacctcaggcggtggtcacttgtcgggtgactggtgttgca
aataaatatgcaaaatgcaccatactgatggttcacaacaatattttgccttacccattt
gtaggcattatccggaaagaaaatgtgtacggttctgcgaaaaatgaaactgaagtcagt
atgtacgagtgttttcaagagggggatattgttttagctaaagtgttctcgttgggtgat
agcttctcttatttgctcagtaccgaagaattagaacttggtgtatttgttggctattgt
aaagagaaacacaaaatgcagccaactgccgacaaacagcacttacattgtgaaatatgc
ttaacaaaggagcctagaaaaattgccgacttggaatcggacgaagaaattctaaaatgg
aaaagaaggcattatggaaaacgttga
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