KEGG   Trichinella spiralis: Tsp_10755
Entry
Tsp_10755         CDS       T01609                                 
Name
(RefSeq) putative LSM domain protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
tsp  Trichinella spiralis
Pathway
tsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tsp_10755
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_10755
   03041 Spliceosome [BR:tsp03041]
    Tsp_10755
   03032 DNA replication proteins [BR:tsp03032]
    Tsp_10755
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     Tsp_10755
Spliceosome [BR:tsp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    Tsp_10755
  U2 snRNP components
    Tsp_10755
 Complex B
  U1 snRNP components
    Tsp_10755
  U4/U6.U5 tri-snRNP components
    Tsp_10755
 Complex C
  U2 snRNP components
    Tsp_10755
DNA replication proteins [BR:tsp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     Tsp_10755
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 10906945
NCBI-ProteinID: XP_003373784
UniProt: E5SMD7
LinkDB
Position
Unknown
AA seq 229 aa
MKTRTTQSTTKNKSYPRNDQLTVVTVGKSHKMIGHLNYRVKIVLQDSRILIGYLKGIFRI
FIFDDRTDFLRTTFDKYMNVVLSDCEEFRRYRPKEGRTAEREEKRTLGFILLRGEHIVSM
SVDGPPLKDDDVPQIPKCGGIPGPGMAKPVGRGMPFVPMPGMAPGLQGPIRGVGGPATAM
MQPQYGMPGTPMPGMVPPRLPGTPMPVRQPGFTPAPLMRGPPPPPSSST
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaagacgcggacaacacaaagcacaactaaaaacaaaagttatccgagaaatgatcag
ttaaccgtagtaactgttggaaaaagtcataagatgattgggcatctgaattatcgggtg
aaaatagttttacaagattcacgaattctaatcggatatttgaaaggtatttttcgaatt
tttatttttgatgataggactgactttttacgtactacatttgacaagtatatgaatgtt
gtattgtccgactgcgaagaatttcgtcgctatcggccgaaagagggacgaacagcagag
cgcgaagaaaagcgcactcttggatttattttacttcgtggcgagcacattgttagtatg
tcggttgatggtccacctttaaaagatgacgatgttccgcaaattccgaagtgtggtggt
attcctggaccgggaatggcaaaacctgttggacgcggaatgccattcgttccaatgcct
ggaatggcaccaggcttacaagggccaatcagaggagttggtgggcctgcaacagcgatg
atgcagccgcaatatggtatgccaggaactccgatgccgggaatggttccaccacgtctt
cctgggacaccaatgcctgtacgtcaacccggttttactcctgctcccctaatgcgaggc
ccgccgccgccaccttcatcttcaacttga

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