Trichinella spiralis: Tsp_10755
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Entry
Tsp_10755 CDS
T01609
Name
(RefSeq) putative LSM domain protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tsp
Trichinella spiralis
Pathway
tsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tsp_10755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_10755
03041 Spliceosome [BR:
tsp03041
]
Tsp_10755
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_10755
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
Tsp_10755
Spliceosome [BR:
tsp03041
]
Complex A
U1 snRNP components
Sm proteins
Tsp_10755
U2 snRNP components
Tsp_10755
Complex B
U1 snRNP components
Tsp_10755
U4/U6.U5 tri-snRNP components
Tsp_10755
Complex C
U2 snRNP components
Tsp_10755
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
Tsp_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
10906945
NCBI-ProteinID:
XP_003373784
UniProt:
E5SMD7
LinkDB
All DBs
Position
Unknown
AA seq
229 aa
AA seq
DB search
MKTRTTQSTTKNKSYPRNDQLTVVTVGKSHKMIGHLNYRVKIVLQDSRILIGYLKGIFRI
FIFDDRTDFLRTTFDKYMNVVLSDCEEFRRYRPKEGRTAEREEKRTLGFILLRGEHIVSM
SVDGPPLKDDDVPQIPKCGGIPGPGMAKPVGRGMPFVPMPGMAPGLQGPIRGVGGPATAM
MQPQYGMPGTPMPGMVPPRLPGTPMPVRQPGFTPAPLMRGPPPPPSSST
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcggacaacacaaagcacaactaaaaacaaaagttatccgagaaatgatcag
ttaaccgtagtaactgttggaaaaagtcataagatgattgggcatctgaattatcgggtg
aaaatagttttacaagattcacgaattctaatcggatatttgaaaggtatttttcgaatt
tttatttttgatgataggactgactttttacgtactacatttgacaagtatatgaatgtt
gtattgtccgactgcgaagaatttcgtcgctatcggccgaaagagggacgaacagcagag
cgcgaagaaaagcgcactcttggatttattttacttcgtggcgagcacattgttagtatg
tcggttgatggtccacctttaaaagatgacgatgttccgcaaattccgaagtgtggtggt
attcctggaccgggaatggcaaaacctgttggacgcggaatgccattcgttccaatgcct
ggaatggcaccaggcttacaagggccaatcagaggagttggtgggcctgcaacagcgatg
atgcagccgcaatatggtatgccaggaactccgatgccgggaatggttccaccacgtctt
cctgggacaccaatgcctgtacgtcaacccggttttactcctgctcccctaatgcgaggc
ccgccgccgccaccttcatcttcaacttga
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