Trichinella spiralis: Tsp_10832
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Entry
Tsp_10832 CDS
T01609
Name
(RefSeq) putative helix-loop-helix DNA-binding domain protein
KO
K09105
transcription factor E3
Organism
tsp
Trichinella spiralis
Pathway
tsp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
Tsp_10832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_10832
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
Tsp_10832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
DUF3619
Motif
Other DBs
NCBI-GeneID:
10897200
NCBI-ProteinID:
XP_003370223
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MQSRIVPKLQVVRERAISERQTSQTNSSSKPSTTAANGGKAKTSRAFTVASASSPAFASL
PVRFSSTRVVHLQPQVLHYLRVAHIGGAQFCIFFVHVNSNKESIAEWRSALLSSSLPTSL
NHSRCLKNVPYSNNISKSSRDGGVGRVNTAKSAFTFAQSSLIGDGGGNNSPVTPHSPPQY
TDSPRSASFTSAQSELDDIIIDEILSMEDDIQQNTRSHQACILTFYYVGGSHPCSGNLEA
LLSEGRVQYSTRKVSSSAPSTSSLDADLFGHDDMIREQESMRDRRKKDIHNMIERRRRYN
INDRIKELSTLLPKSCTELVQFY
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgcggatcgtccccaagttgcaagtggttcgagaaagggcaatttccgaacgt
caaaccagtcaaacaaattcttcttcaaagccgtccactactgctgccaacggtggaaaa
gcaaaaacgagtcgagcttttactgtggcaagcgcatcatcgcctgcgttcgcttctttg
cctgttcgtttctccagcactcgagttgttcatctgcagccgcaagtgttgcactattta
agagttgcacatattggcggtgcacagttttgcattttctttgtacatgtgaactcgaac
aaggagagcatagctgaatggcggagcgccttgctaagttcgtcactgccgactagtttg
aatcatagtcggtgcttgaaaaatgttccttacagcaacaatatttcgaaatcgtccaga
gacggcggtgttggtcgggtcaacactgcaaaatcagctttcacgtttgctcagtcttct
ttgatcggcgacggaggtgggaacaatagtcctgtcacgccgcacagtccgccacagtat
acggacagtccacgtagtgcctcattcacgagcgctcagtcggaactcgatgatataata
atcgatgaaattttatcaatggaagatgatatacagcaaaatacgcgttcacatcaggca
tgtattctgactttttattatgtaggcggtagccatccttgctcaggaaatttggaagcg
ctattgtccgaaggacgggtccagtacagtacgcggaaagtgtcgagcagtgctccgagt
acgtcgtcgttggatgcggaccttttcggtcatgatgacatgatccgagagcaggaatcg
atgcgtgaccggcgcaagaaggacatacacaacatgattgaacgccgtcggcggtacaat
ataaacgatcgtattaaagaattgagtacgctgttgccaaaatcttgcaccgagttggtt
caattttattaa
DBGET
integrated database retrieval system
