Trichinella spiralis: Tsp_12020
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Entry
Tsp_12020 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_12020
Enzymes [BR:
tsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Tsp_12020
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
Tsp_12020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
Rad17
AAA_7
T2SSE
ABC_tran
AAA_16
DEAD
AAA_23
AAA_24
Motif
Other DBs
NCBI-GeneID:
10905854
NCBI-ProteinID:
XP_003368462
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MRVEIDKKSSSLARNNIPNSLEIYGKQHTVMFLINNQSVMRTLCSFRELSLQICSCQSRN
LQIVYYLPKKYGKSYDLAKNGMRVSKYVLSVSPILYYLTISYRSFSKWQNRFVFDCAHLK
SEKSFKCSTLLFGDIANCLPDELWNDGLSVDMLSLKEWHELTCAFTQKHISRRSFQKYHV
RISKDKTAMIFPSFTHFGEECYPVPVGVKLVSLTDFKEIPLQAVSSPRGLFGFNLIMSIS
DVVVLALSEWEAMFLFEKSGLPVVVLPKNCGQFENEVAHSSLIKGLSIYDYYTRSSKSKV
SVPQCLAQSLRMLHPCISPIGDLRSTVFDYIYRQGVTKGIAQWNRFHILNSYLGGLRLGE
LTIVSGPTGCGKTTFISLYSLDLCEQLEKQINTLWCSFEVSTARLVHVMMQQLNSRKIDE
TIPERELEIMYNKLSLLPLYFTKFNGSFEFREVVEAIEHHVEIYDIRHVVVDNLQFLAGA
VDQMVSDRFTVQDRVFAEFRRIATERNVHLTLVVHPRKELDSGQLSLNSLYGGVKASQEA
DNVYVVQVKREIDALGIPKIHRYFQILKNRRMGELEVSNRLELKFNHDTVSHRIVRHVDP
KINAK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagaaattgataagaaatctagttcacttgcccgtaacaatattcctaacagc
ttggaaatttatggaaaacaacatactgtaatgtttttgattaacaatcaatcagtaatg
agaacgttgtgctcttttagagaactttcattgcaaatatgcagttgtcaatcacgaaat
cttcaaattgtatattatttacctaaaaaatatggcaaatcatacgatttggcaaaaaat
ggaatgcgggtctcaaaatatgttctatcagtttctccgattctttattatttaacaatc
tcttatcggtcattttcaaaatggcaaaatcgttttgtcttcgattgtgctcatcttaag
agtgaaaaaagttttaaatgctcaacgttactttttggtgatatagctaattgtctgccg
gatgaactttggaacgacggcttgtccgttgatatgctaagtttaaaggaatggcatgaa
ttgacttgtgcgtttacacagaagcatataagtagacgaagttttcaaaaataccacgtg
agaatttcaaaagacaaaactgcaatgatatttccgagttttacacattttggagaagaa
tgttatccagtaccggttggcgtgaagctcgtctcgttgactgactttaaagaaattcca
cttcaagcagtttcatctccacgcggtctgtttggattcaatttaataatgtccataagt
gatgttgtggtactagctttgtctgagtgggaagcgatgtttttgtttgaaaaaagtgga
ttgcccgtcgttgttttgcccaaaaattgcggacagtttgaaaatgaagttgcccattct
tcactgataaaaggcttatcaatttatgattattatacgcgatcgtcgaagtcaaaagtt
tcagtgccgcaatgtctagctcaatcattgcgaatgctgcatccatgcatttcaccaatc
ggtgacctcagatctacagtatttgattacatttatcggcagggtgttaccaaaggcatt
gcgcaatggaatcgtttccacatactgaattcatatttgggtggtttgcgacttggggaa
ttgaccattgtttccggtccaacaggatgcggcaagacaacatttatcagtttgtattcg
ttggatttatgcgaacaattggaaaagcagataaatacattgtggtgcagtttcgaagtc
agtaccgctcgactggtccacgtcatgatgcaacaattgaatagtcgaaaaattgacgaa
actataccagaacgtgagcttgaaattatgtacaacaaactgtccctgttgccactgtat
tttacaaaattcaacggctcgtttgaatttcgtgaagttgtcgaagcaattgaacatcac
gttgaaatttacgacattcgtcacgtggtggtagataatttgcaatttcttgccggcgct
gttgatcaaatggtcagcgatcgctttactgttcaagatcgcgttttcgccgaatttagg
cgcattgctacagaaagaaatgtacatcttactcttgttgttcatccgcgcaaggaattg
gacagcggtcagttgtcgttgaattcgctttatggaggtgttaaggcatcacaagaagct
gacaatgtttatgttgtgcaagtgaaacgtgaaattgatgctttaggtattccaaaaatt
cacagatattttcaaattttgaaaaatcgtcgaatgggtgaactggaggtgagcaatcga
cttgaactgaaattcaaccatgatacagttagtcatcgcatcgtacggcacgttgatccg
aagattaatgctaaatga
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