KEGG   Telmatocola sphagniphila: KIH39_21865
Entry
KIH39_21865       CDS       T07229                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
tsph  Telmatocola sphagniphila
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_TEP1_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Sigma70_r4_2 NBCH_WD40 Sigma70_r2 WDR90_beta-prop_4th eIF2A Beta-prop_IFT122_1st Cytochrom_D1 Beta-prop_WDR19_1st Beta-prop_SCAP Nbas_N Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Sigma70_r4 B-prop_COPA_B_2nd WD40_like YNCE Pectate_lyase22 HTH_30 YL1_C
Other DBs
NCBI-ProteinID: QVL31467
UniProt: A0A8E6B403
LinkDB
Position
complement(5465793..5469047)
AA seq 1084 aa
MTPILKSLIHSLRADLEMKAAAVTDAQLLERYVQNRDSLAFDLLFWRHAPMVYGVCNRLL
PNPAEAEDACQAVFVILSRKANILHRGSNLAGWLHRIAYRVAFNVRRGQKRRSSHEQKAA
RSEVIHCDPLQAAISREILQILDAEITRLPSRYRDPLVLCELEGRSREAAACELKIPVGT
LDSRLSRARERLRTRLKVVALPSLLASTIPNTINASAILAPALSSTVLPLAGGVGALAFK
KSLAFIAASVLLVSGTVYNTLNSQQPEKEKPSEKAVQKPLEMPPEKNYIDPEGAPLPPGA
LVRLGTQRFRHAGEVVALAYSPDSKMLASASLDPKDSTVRIWDSEKGKELLRIQQPSEPR
SQGVLSSKEISLGFSQDNKKLFIADQKAIRIWNIEEQKEIANFDLRLDPKLSHRLVAVKI
TPNGKNAIYIWQNESIELRSLTDGKVIHRVATITDSREIELAFTTKGDRFVFAGKPDKSI
QIFEVATLRNIGTIPAPVDSLYRVRFLDDGQNLVLLTGRNENFVRNVEIIDIHSKKMLRS
AKVDTYASCIDVSPDGKLIVVGNGQGNFIEIVDAVSLNKIGRLHSFHYQQDLVFSPNGSS
LTGIIFGSSTISLWDLSTRNYLPNSPEQRDFFESLFSSDGKSLILTRSHFLTSIDWRTGK
TISRTKEPNYEFGASITYSADCKLKVFNKQMDKSSSQSPNTLLIAEASTGKVLHELVGHK
DYPFQKSFSADGSRLATGGLDKAIFIWDVKSGKQIAHFTPDQLNGFEKFLLSNDGRKLIT
NRYQENQKHYEISVWDVENTKKILAITDPTLIYRQLAISPGGSYLACNSASTNPASSEGN
SNPCSVTIWSLAKGERFQTLPSHSQLFGNPGIWIGFSPNGKLLATGDADGHLRLWEVATG
KEMFAFEGHKTSVSGNFSPDGKLLVAASEDAPCYIWEVIPTQPLKCDPEQSFKDLGDEDA
KKAFQAIRALASNPNLALEVIRKNLKPLPAPDPKQVENWIKDLDSNRFAAREKATAELVK
IADRIPKELSKAEQIVGVEGRGRLKTILESIGTPSPEYLKQLRAVQVFDYIGTPEAKKLA
ETFR
NT seq 3255 nt   +upstreamnt  +downstreamnt
atgacgccgattcttaagtcgctgattcattcgctgcgtgccgatcttgaaatgaaagcg
gcggcggtaaccgatgcgcaactgctcgagcgttacgtgcaaaatcgcgactccctggct
ttcgacctgcttttctggcgacatgcgccgatggtgtacggcgtctgcaaccggttgctc
ccgaacccggcggaagccgaagatgcttgccaggccgtgtttgtgatcctgtctagaaaa
gccaatattttgcatcgcggttctaatctggcgggttggctccatcgcattgcctaccgg
gtggctttcaatgtacggcgcggtcaaaaacgccggtcgagtcatgaacagaaggcggcg
agatcggaagtaattcactgcgatcccttgcaggccgcgatctctcgggaaatccttcaa
atcctggatgccgaaattacccgtttgccttctcgctaccgcgatcctctggtgttatgc
gaactcgaggggcgttctcgggaagcggcggcctgcgagctcaaaattccggtgggcact
ttggattcaagattgtcccgggcccgggaacgcttgcgtacgcgacttaaagtggttgct
ctgccttcgctactggcttccactattcccaacactatcaatgcttcggcgattcttgca
cccgcattatcctcgacggttttgccactcgcgggaggtgtgggagcgctcgctttcaag
aagagcctggccttcatcgcggccagcgtcttattggtctcgggaacagtttacaacacc
ctaaactcgcaacaaccggagaaggaaaagccctctgagaaggccgtgcagaagccgttg
gagatgccgccggaaaagaattacatcgatcccgaaggcgcgccgttgccgccgggggct
ctcgtgcgcctaggaacgcagagatttcggcatgcgggagaggttgtagcgctggcctat
tctcccgatagcaagatgctggcttcggcctcgctagatcctaaggattctacggttcgc
atttgggatagtgaaaaagggaaggaattgcttcgtatccaacaaccgtctgaaccccga
tcccagggagtactatcctcaaaagagatttcgctcggtttttcgcaggataacaagaag
cttttcatagcagaccaaaaggcaattagaatttggaacatcgaagagcagaaagaaatc
gctaattttgatttgcgactcgatcccaaattatcgcaccgtttagtcgctgttaaaatc
actccgaatggcaagaatgctatttatatctggcagaatgaatcgatcgaactgcgatct
ttaaccgacggtaaagtcattcatagagttgccactattacggactcccgtgaaatcgaa
ctcgcattcacaaccaaaggtgatcgatttgtattcgctggtaagccagacaaatccatt
cagatattcgaagtagctaccctaagaaatatcggaactattccggcgccggtagactct
ctatatcgggtccgttttctcgatgatggccaaaacctcgttttactcacaggtcgaaac
gaaaatttcgttcgaaatgtcgagatcatcgacattcattctaaaaaaatgctccgctcg
gccaaagtcgatacttatgcgagttgtatagacgtttctcccgatggaaagttgattgtt
gtggggaacggacaaggtaatttcattgaaatagttgatgcggtcagtctaaataaaatc
ggtagattacactctttccactatcagcaagacctcgttttctctccaaacgggagcagt
ttgacaggtataatttttggcagtagtactattagtctctgggatttaagtactagaaac
tatttacctaattcacccgaacagcgggacttctttgaaagtcttttttcgtctgatgga
aagtcactcatactcaccagatcgcactttctaacaagtatcgactggcgaacaggaaaa
acaattagcagaaccaaagagccgaactacgaattcggagcgtccattacgtactcagca
gattgcaaattaaaagtcttcaacaaacaaatggataagagttcatctcagtcgccaaat
acgcttctaattgccgaggccagcactggcaaagtgcttcacgagttagtgggccacaag
gattatccatttcaaaaatcattctcggcggatggatcgagattggctaccggtgggcta
gacaaggcgattttcatttgggatgttaaatcgggaaaacaaattgcccattttacacca
gaccaactgaatggatttgaaaaatttcttctttcgaacgatggaaggaaattgattaca
aatcggtatcaagaaaatcagaaacactatgagataagtgtctgggatgtcgagaacaca
aaaaaaattctagctattaccgaccctacgctgatctatcgccaacttgcaatctccccg
ggtgggtcgtacctagcctgtaatagtgcatcaactaatcccgcttcaagtgaaggcaac
tcgaatccctgctcagtgactatctggagcctagccaaaggagaaagatttcaaactctt
cccagtcatagccagctttttggtaatcctggaatctggattggattttcaccaaacgga
aaattgctcgcaaccggtgatgctgacggtcatttacgactctgggaagtcgctactgga
aaagaaatgttcgcattcgaaggtcataagacctctgtctccggaaatttctcgcctgac
ggaaaactcctggtcgctgccagcgaagacgccccctgctatatctgggaagtcattccc
acccagcctttgaagtgcgacccggaacaatcgttcaaagacttaggtgatgaagatgct
aagaaagccttccaggccattcgcgctttggcttctaatcccaatttggctctggaagtt
atccggaagaatttgaagccacttcccgcacccgatccgaaacaggtggaaaactggatc
aaagatctcgattccaacaggttcgcggcacgggaaaaagcgaccgccgagctagtgaag
attgccgacagaatacctaaagagttgtctaaggccgagcagatcgtcggggtcgaagga
cgtggccgtcttaaaacgattttggaaagcatcggcaccccatccccagagtatttgaag
caactccgggccgtacaggtgttcgattacatcggtactcccgaggccaagaagctcgcc
gagacgttccgataa

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